RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 Q9N2K0 584 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TUBG2Q9NRH3 451 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC2A9Q9NRM0 540 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 RPRMQ9NS64 109 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC7A10Q9NS82 523 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 LYRM2Q9NU23 88 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF701Q9NV72 531 aaPredicted RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM38BQ9NVV0 291 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 P4HTMQ9NXG6 502 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 NAT8Q9UHE5 227 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 AK3Q9UIJ7 227 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TINAGQ9UJW2 476 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 RALYQ9UKM9 306 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 MCTS1Q9ULC4 181 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GAB2Q9UQC2 676 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 RCL1Q9Y2P8 373 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 FBXO7Q9Y3I1 522 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 OR2W1Q9Y3N9 320 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 TIMM9Q9Y5J7 89 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 MPC1Q9Y5U8 109 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SLCO1B1Q9Y6L6 691 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 NCKAP5O14513 1909 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 F5P12259 2224 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 SPAG17Q6Q759 2223 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 DIDO1Q9BTC0 2240 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 DOCK10Q96BY6 2186 aa1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 GOLGB1Q14789 3259 aaKnown RBP1.71□□□□□ -2.14
SNRNP40-207ENST00000491106 PCNX2A6NKB5 2137 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 KIAA0100Q14667 2235 aaKnown RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CABIN1Q9Y6J0 2220 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1-27A0A075B6S5 117 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A087X0M5 115 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 LOC101059948A0A1B0GTJ6 334 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1B0GX30 115 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1W2PPH5 198 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 MAP1LC3B2A6NCE7 125 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC22A20A6NK97 555 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SHISA7A6NL88 538 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CD300LBA8K4G0 201 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 RNF212BA8MTL3 300 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 A8MWP6 167 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CDRT15L2A8MXV6 281 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 C9J4A7 227 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 NPIPB11E5RHQ5 1161 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF587BE7ETH6 402 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 H0Y980 276 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM250H0YL14 139 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 H0YL77 283 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 MKRN2OSH3BPM6 223 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SH2D1BO14796 132 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 DEGS1O15121 323 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SPRY1O43609 319 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ANGPTL7O43827 346 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CYTIPO60759 359 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BKO60814 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ZG16O60844 167 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 MRPL33O75394 65 aaKnown RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CLN5O75503 358 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SCRG1O75711 98 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OR7C1O76099 320 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 NAPSAO96009 420 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PDGFBP01127 241 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HLA-HP01893 362 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 APOHP02749 345 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 OPN1LWP04000 364 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 P04436 131 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 REG1AP05451 166 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BJP06899 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SCTP09683 121 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 METTL15P1P0C7V9 234 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TRGC1P0CF51 173 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PGA5P0DJD9 388 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CD99P14209 185 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 LIFP15018 202 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CBR1P16152 277 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF32P17041 273 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 GZMHP20718 246 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CRYGSP22914 178 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ANOS1P23352 680 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BOP23527 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SRD5A2P31213 254 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HOXA6P31267 233 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BBP33778 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SRP14P37108 136 aaKnown RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CDKN1AP38936 164 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 AKR1C3P42330 323 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 CXCL12P48061 93 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 PSMB3P49720 205 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 FHITP49789 147 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TNFSF10P50591 281 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SSR4P51571 173 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 DYNLT3P51808 116 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 ATP5IP56385 69 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 RBM11P57052 281 aaKnown RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 MLF1P58340 268 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 HIST1H2BDP58876 126 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 TAS2R60P59551 318 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 FXYD4P59646 89 aa1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 FGF12P61328 243 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms