RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 C14orf166Q9Y224 244 aaKnown RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 UBE2J1Q9Y385 318 aaPredicted RBP6.16□□□□□ -1.42
CLDN1-202ENST00000490800 OR2W1Q9Y3N9 320 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 LINC00312Q9Y6C7 94 aa6.16□□□□□ -1.42
CLDN1-202ENST00000490800 IGHV3-43A0A0B4J1X8 118 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 CRYM-AS1A6NIL9 109 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF729A6NN14 1252 aaPredicted RBP6.15□□□□□ -1.42
CLDN1-202ENST00000490800 GPR31O00270 319 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 SSNA1O43805 119 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 SFT2D2O95562 160 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 HLA-AP01891 365 aaKnown RBP6.15□□□□□ -1.42
CLDN1-202ENST00000490800 SULT1A3P0DMM9 295 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 SULT1A4P0DMN0 295 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 PPIAL4GP0DN37 164 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 IGHV3-43DP0DP04 118 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 GNRHRP30968 328 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 PPP1CCP36873 323 aaKnown RBP6.15□□□□□ -1.42
CLDN1-202ENST00000490800 LUMP51884 338 aaPredicted RBP6.15□□□□□ -1.42
CLDN1-202ENST00000490800 DLX6P56179 175 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 PIGPP57054 158 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 LOXL3P58215 753 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 RND3P61587 244 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 LTC4SQ16873 150 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 C2orf68Q2NKX9 166 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 PHLDA2Q53GA4 152 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 TMEM128Q5BJH2 165 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 UTF1Q5T230 341 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 TMEM200BQ69YZ2 307 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 BRD3OSQ6XYD6 125 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF818PQ6ZRF7 136 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 AKAP14Q86UN6 197 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 C12orf45Q8N5I9 185 aaPredicted RBP6.15□□□□□ -1.42
CLDN1-202ENST00000490800 OR11H7Q8NGC8 314 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 OR10V1Q8NGI7 309 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 H1FXQ92522 213 aaKnown RBP6.15□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF486Q96H40 463 aaPredicted RBP6.15□□□□□ -1.42
CLDN1-202ENST00000490800 ST6GAL2Q96JF0 529 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 ZNF747Q9BV97 191 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 RAB9BQ9NP90 201 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 OR2S2Q9NQN1 319 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 CCL28Q9NRJ3 127 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 TAS2R3Q9NYW6 316 aa6.15□□□□□ -1.42
CLDN1-202ENST00000490800 TRAV40A0A0B4J280 105 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 MDFIC2A0A1B0GVS7 189 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 HSD17B6O14756 317 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 YPEL1O60688 119 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 MMP23AO75900 390 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 CCNKO75909 580 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 DUS4LO95620 317 aaKnown RBP6.14□□□□□ -1.43
CLDN1-202ENST00000490800 IGLV2-14P01704 120 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 OR8U9P0C7N5 309 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 CCL3L1P16619 93 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 CXCL3P19876 107 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 OMGP23515 440 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 CD34P28906 385 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 DEFB112Q30KQ8 113 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 ANKRD55Q3KP44 614 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 ABCA11PQ4W5N1 156 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 MORN2Q502X0 79 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 PRAMEF5Q5TYX0 476 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 LPCAT3Q6P1A2 487 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 C9orf139Q6ZV77 190 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 FAM185AQ8N0U4 392 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 STPG3Q8N7X2 389 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 OR2AK2Q8NG84 335 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 OR8U1Q8NH10 309 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 CASTOR1Q8WTX7 329 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 MITD1Q8WV92 249 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 RTN4IP1Q8WWV3 396 aaPredicted RBP6.14□□□□□ -1.43
CLDN1-202ENST00000490800 ZNF714Q96N38 554 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 YPEL2Q96QA6 119 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 PCGF1Q9BSM1 259 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 NAA60Q9H7X0 242 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 SLC2A9Q9NRM0 540 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 TNFRSF19Q9NS68 423 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 IDI2-AS1Q9NZ38 188 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 GNG12Q9UBI6 72 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 MGAT4CQ9UBM8 478 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 JPT1Q9UK76 154 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 RNF150Q9ULK6 438 aa6.14□□□□□ -1.43
CLDN1-202ENST00000490800 A0A0B4J2A0 478 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 TEX13DA0A0J9YY54 714 aaPredicted RBP6.13□□□□□ -1.43
CLDN1-202ENST00000490800 CLDN34H7C241 214 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 ITGB1BP1O14713 200 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 MPPED1O15442 326 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 HOXA3O43365 443 aaPredicted RBP6.13□□□□□ -1.43
CLDN1-202ENST00000490800 PGLYRP1O75594 196 aaPredicted RBP6.13□□□□□ -1.43
CLDN1-202ENST00000490800 SCGB1D2O95969 90 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 CD83Q01151 205 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 TMEM187Q14656 261 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 TMEM30BQ3MIR4 351 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 TOR2AQ5JU69 321 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 LY6G6FQ5SQ64 297 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 LIN54Q6MZP7 749 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 TBC1D26Q86UD7 250 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 SGPP2Q8IWX5 399 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 DRAM1Q8N682 238 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 CCDC71LQ8N9Z2 235 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 UXS1Q8NBZ7 420 aa6.13□□□□□ -1.43
CLDN1-202ENST00000490800 LY6G5BQ8NDX9 201 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms