RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.5■■□□□ 1.03
HOXB3-211ENST00000490677 DCUN1D4Q92564 292 aa21.5■■□□□ 1.03
HOXB3-211ENST00000490677 PDCD5O14737 125 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 ARPC1BO15143 372 aaKnown RBP21.49■■□□□ 1.03
HOXB3-211ENST00000490677 CA2P00918 260 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 IGLV2-23P01705 113 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 HIST1H1DP16402 221 aaKnown RBP21.49■■□□□ 1.03
HOXB3-211ENST00000490677 RAB6AP20340 208 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 GALP22466 123 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 RANBP1P43487 201 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 SERPINB10P48595 397 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 GABARAPL2P60520 117 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 MAFIPQ8WZ33 124 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 CLCC1Q96S66 551 aa21.49■■□□□ 1.03
HOXB3-211ENST00000490677 ZNF230Q9UIE0 474 aaPredicted RBP21.49■■□□□ 1.03
HOXB3-211ENST00000490677 NBEAL2Q6ZNJ1 2754 aa21.48■■□□□ 1.03
HOXB3-211ENST00000490677 M0R1X1 148 aa21.48■■□□□ 1.03
HOXB3-211ENST00000490677 DIRAS3O95661 229 aa21.48■■□□□ 1.03
HOXB3-211ENST00000490677 CRYGBP07316 175 aa21.48■■□□□ 1.03
HOXB3-211ENST00000490677 LFNGQ8NES3 379 aa21.48■■□□□ 1.03
HOXB3-211ENST00000490677 TSNAXQ99598 290 aaKnown RBP21.48■■□□□ 1.03
HOXB3-211ENST00000490677 SDHAF2Q9NX18 166 aa21.48■■□□□ 1.03
HOXB3-211ENST00000490677 IGKV1D-8A0A087WSZ0 117 aa21.47■■□□□ 1.03
HOXB3-211ENST00000490677 LGALS1P09382 135 aaKnown RBP21.47■■□□□ 1.03
HOXB3-211ENST00000490677 RAB3BP20337 219 aa21.47■■□□□ 1.03
HOXB3-211ENST00000490677 SLURP1P55000 103 aa21.47■■□□□ 1.03
HOXB3-211ENST00000490677 ACTBL2Q562R1 376 aa21.47■■□□□ 1.03
HOXB3-211ENST00000490677 UBE2UQ5VVX9 321 aa21.47■■□□□ 1.03
HOXB3-211ENST00000490677 C22orf42Q6IC83 251 aa21.47■■□□□ 1.03
HOXB3-211ENST00000490677 DLX4Q92988 240 aaPredicted RBP21.47■■□□□ 1.03
HOXB3-211ENST00000490677 ELF5Q9UKW6 265 aaPredicted RBP21.47■■□□□ 1.03
HOXB3-211ENST00000490677 IGHV4OR15-8A0A075B7B6 117 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 A0A087WW49 117 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 BET1O15155 118 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 SLC25A17O43808 307 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 OR8U9P0C7N5 309 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 INSL3P51460 131 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 RPS16P62249 146 aaKnown RBP21.46■■□□□ 1.03
HOXB3-211ENST00000490677 TMEM267Q0VDI3 215 aaPredicted RBP21.46■■□□□ 1.03
HOXB3-211ENST00000490677 UNQ5815/PRO19632Q6UWF5 114 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 Q6ZS49 121 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 OR2D2Q9H210 308 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 SLC35D1Q9NTN3 355 aa21.46■■□□□ 1.03
HOXB3-211ENST00000490677 ZNF256Q9Y2P7 627 aaPredicted RBP21.46■■□□□ 1.03
HOXB3-211ENST00000490677 ERICH4A6NGS2 130 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 OVOL1O14753 267 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 MRPS14O60783 128 aaKnown RBP21.45■■□□□ 1.02
HOXB3-211ENST00000490677 APOA2P02652 100 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 MYL9P24844 172 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 SRSF7Q16629 238 aaKnown RBP eCLIP21.45■■□□□ 1.02
HOXB3-211ENST00000490677 MRGPRG-AS1Q2M3A8 158 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 PYHIN1Q6K0P9 492 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 SPARTQ8N0X7 666 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 ABHD5Q8WTS1 349 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 FLYWCH2Q96CP2 140 aaKnown RBP21.45■■□□□ 1.02
HOXB3-211ENST00000490677 STAB2Q8WWQ8 2551 aa21.45■■□□□ 1.02
HOXB3-211ENST00000490677 A0A075B6Q4 140 aa21.44■■□□□ 1.02
HOXB3-211ENST00000490677 GADD45AP24522 165 aa21.44■■□□□ 1.02
HOXB3-211ENST00000490677 PJVKQ0ZLH3 352 aa21.44■■□□□ 1.02
HOXB3-211ENST00000490677 OR10J5Q8NHC4 309 aa21.44■■□□□ 1.02
HOXB3-211ENST00000490677 ARPC1AQ92747 370 aa21.44■■□□□ 1.02
HOXB3-211ENST00000490677 RHOVQ96L33 236 aa21.44■■□□□ 1.02
HOXB3-211ENST00000490677 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP21.44■■□□□ 1.02
HOXB3-211ENST00000490677 SMIM30A4D0T7 59 aa21.43■■□□□ 1.02
HOXB3-211ENST00000490677 LINC01619G3V211 115 aa21.43■■□□□ 1.02
HOXB3-211ENST00000490677 FGF9P31371 208 aaPredicted RBP21.43■■□□□ 1.02
HOXB3-211ENST00000490677 DDB2Q92466 427 aa21.43■■□□□ 1.02
HOXB3-211ENST00000490677 MS4A10Q96PG2 267 aa21.43■■□□□ 1.02
HOXB3-211ENST00000490677 RYR3Q15413 4870 aa21.43■■□□□ 1.02
HOXB3-211ENST00000490677 SRRM4A7MD48 611 aaKnown RBP21.42■■□□□ 1.02
HOXB3-211ENST00000490677 ATP6V1G2O95670 118 aa21.42■■□□□ 1.02
HOXB3-211ENST00000490677 IGHV3-11P01762 117 aa21.42■■□□□ 1.02
HOXB3-211ENST00000490677 MRPS15P82914 257 aaKnown RBP21.42■■□□□ 1.02
HOXB3-211ENST00000490677 FXYD3Q14802 87 aa21.42■■□□□ 1.02
HOXB3-211ENST00000490677 ZNF429Q86V71 674 aa21.42■■□□□ 1.02
HOXB3-211ENST00000490677 H1FOOQ8IZA3 346 aaPredicted RBP21.42■■□□□ 1.02
HOXB3-211ENST00000490677 TXNL4BQ9NX01 149 aaKnown RBP21.42■■□□□ 1.02
HOXB3-211ENST00000490677 DNAH7Q8WXX0 4024 aa21.41■■□□□ 1.02
HOXB3-211ENST00000490677 TMEM177Q53S58 311 aa21.41■■□□□ 1.02
HOXB3-211ENST00000490677 GRPEL2Q8TAA5 225 aa21.41■■□□□ 1.02
HOXB3-211ENST00000490677 SLA2Q9H6Q3 261 aa21.41■■□□□ 1.02
HOXB3-211ENST00000490677 TPPP2P59282 170 aa21.4■■□□□ 1.02
HOXB3-211ENST00000490677 ACSM6Q6P461 480 aa21.4■■□□□ 1.02
HOXB3-211ENST00000490677 WWC2-AS2Q96NR7 200 aa21.4■■□□□ 1.02
HOXB3-211ENST00000490677 METTL21EPA6NDL7 271 aa21.39■■□□□ 1.01
HOXB3-211ENST00000490677 HSPB1P04792 205 aaKnown RBP21.39■■□□□ 1.01
HOXB3-211ENST00000490677 NHLRC4P0CG21 123 aaPredicted RBP21.39■■□□□ 1.01
HOXB3-211ENST00000490677 LGALS7P47929 136 aa21.39■■□□□ 1.01
HOXB3-211ENST00000490677 BVESQ8NE79 360 aa21.39■■□□□ 1.01
HOXB3-211ENST00000490677 HARBI1Q96MB7 349 aa21.39■■□□□ 1.01
HOXB3-211ENST00000490677 ATG5Q9H1Y0 275 aa21.39■■□□□ 1.01
HOXB3-211ENST00000490677 LINC00473A8K010 186 aa21.38■■□□□ 1.01
HOXB3-211ENST00000490677 NOTOA8MTQ0 251 aa21.38■■□□□ 1.01
HOXB3-211ENST00000490677 DTYMKP23919 212 aa21.38■■□□□ 1.01
HOXB3-211ENST00000490677 DUTP33316 252 aaKnown RBP21.38■■□□□ 1.01
HOXB3-211ENST00000490677 ARFRP1Q13795 201 aa21.38■■□□□ 1.01
HOXB3-211ENST00000490677 TRGV3P03979 118 aa21.37■■□□□ 1.01
HOXB3-211ENST00000490677 PSMB9P28065 219 aa21.37■■□□□ 1.01
HOXB3-211ENST00000490677 TAGLNQ01995 201 aaKnown RBP21.37■■□□□ 1.01
HOXB3-211ENST00000490677 CDNFQ49AH0 187 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms