RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 NAP1L6A6NFF2 107 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 LINC00473A8K010 186 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 CLDN34H7C241 214 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 SNRNP70P08621 437 aaKnown RBP12.9□□□□□ -0.34
CLIC4-203ENST00000489758 LPCAT3Q6P1A2 487 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 CCBE1Q6UXH8 406 aaPredicted RBP12.9□□□□□ -0.34
CLIC4-203ENST00000489758 PRIMA1Q86XR5 153 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 THNSL2Q86YJ6 484 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 OR5R1Q8NH85 324 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 HSD17B10Q99714 261 aaKnown RBP12.9□□□□□ -0.34
CLIC4-203ENST00000489758 TCF19Q9Y242 345 aa12.9□□□□□ -0.34
CLIC4-203ENST00000489758 A0A0A6YYJ9 748 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 GPR31O00270 319 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 LYRM1O43325 122 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 TNFSF12O43508 249 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 PGLYRP1O75594 196 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-203ENST00000489758 IGKV1D-33P01593 117 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 IGKV1-33P01594 117 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 FAM106CPP0CH98 169 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 PGAM2P15259 253 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 PI3P19957 117 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 ECI1P42126 302 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 THBS3P49746 956 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 CCR6P51684 374 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 BRWD1-AS2P59051 145 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 ASAH1Q13510 395 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 SURF2Q15527 256 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-203ENST00000489758 ZNF66Q6ZN08 573 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 Q8N6K4 173 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 CAPSLQ8WWF8 208 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 BORCS5Q969J3 196 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 ADTRPQ96IZ2 230 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 DUX5Q96PT3 197 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 RTBDNQ9BSG5 229 aaPredicted RBP12.89□□□□□ -0.35
CLIC4-203ENST00000489758 CHIAQ9BZP6 476 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 GPR132Q9UNW8 380 aa12.89□□□□□ -0.35
CLIC4-203ENST00000489758 TCF21O43680 179 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 CTSDP07339 412 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-203ENST00000489758 MC5RP33032 325 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 PHLDA2Q53GA4 152 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 KCTD9Q7L273 389 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 CMTM1Q8IZ96 169 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 ZFAND1Q8TCF1 268 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 ZNF486Q96H40 463 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-203ENST00000489758 EAF1Q96JC9 268 aaPredicted RBP12.88□□□□□ -0.35
CLIC4-203ENST00000489758 RITA1Q96K30 269 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 C5orf66Q9H5L9 145 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 TNFRSF19Q9NS68 423 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 VSIG4Q9Y279 399 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 WASHC3Q9Y3C0 194 aa12.88□□□□□ -0.35
CLIC4-203ENST00000489758 CENPXA8MT69 81 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 CHST1O43916 411 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 NDUFB6O95139 128 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 MOSP00540 346 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 IGKV1-16P04430 117 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 RND3P61587 244 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 UBA52P62987 128 aaKnown RBP12.87□□□□□ -0.35
CLIC4-203ENST00000489758 LY6EQ16553 131 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 TMEM219Q86XT9 240 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 SLC25A21Q9BQT8 299 aaPredicted RBP12.87□□□□□ -0.35
CLIC4-203ENST00000489758 CUBNO60494 3623 aa12.87□□□□□ -0.35
CLIC4-203ENST00000489758 BTBD17A6NE02 478 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 APOA2P02652 100 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 RLN1P04808 185 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 RNASE1P07998 156 aaKnown RBP12.86□□□□□ -0.35
CLIC4-203ENST00000489758 SLC6A1P30531 599 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 PIGPP57054 158 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 TAGLNQ01995 201 aaKnown RBP12.86□□□□□ -0.35
CLIC4-203ENST00000489758 HNF4GQ14541 408 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 RBMS2Q15434 407 aaKnown RBP12.86□□□□□ -0.35
CLIC4-203ENST00000489758 TBC1D26Q86UD7 250 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 PDPNQ86YL7 162 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 OR2T10Q8NGZ9 312 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 TCTEX1D2Q8WW35 142 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 JMJD8Q96S16 334 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 MDFIQ99750 246 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
CLIC4-203ENST00000489758 H7C2Y5 167 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 MPPED1O15442 326 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 GPR137BO60478 399 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 OR2F2O95006 317 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 IFNA2P01563 188 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 TMEM11P17152 192 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 SRSF2Q01130 221 aaKnown RBP12.85□□□□□ -0.35
CLIC4-203ENST00000489758 HES1Q14469 280 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 ABCA11PQ4W5N1 156 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 OR2B11Q5JQS5 317 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 LIAT1Q6ZQX7 453 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 OR51H1Q8NH63 302 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 TMEM230Q96A57 120 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 RBM14Q96PK6 669 aaKnown RBP12.85□□□□□ -0.35
CLIC4-203ENST00000489758 SCGB3A2Q96PL1 93 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 PLSCR3Q9NRY6 295 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 PITPNC1Q9UKF7 332 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 PRELID3BQ9Y3B1 194 aa12.85□□□□□ -0.35
CLIC4-203ENST00000489758 RNF212BA8MTL3 300 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 RAMP3O60896 148 aa12.84□□□□□ -0.35
CLIC4-203ENST00000489758 FCGR3BO75015 233 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms