RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 S1PR2O95136 353 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 RAB13P51153 203 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 RPP30P78346 268 aaKnown RBP12.45□□□□□ -0.42
COL9A1-208ENST00000489611 ZNF816Q0VGE8 651 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-208ENST00000489611 TMEM41BQ5BJD5 291 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 OR10P1Q8NGE3 313 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 CLDND2Q8NHS1 167 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 DTD1Q8TEA8 209 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 TAF15Q92804 592 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL9A1-208ENST00000489611 P2RX4Q99571 388 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 FAM234AQ9H0X4 552 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 BIN3Q9NQY0 253 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 PSG11Q9UQ72 335 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 MARCH11A6NNE9 402 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 PRRG2O14669 202 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 IFNA1P01562 189 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 EGR1P18146 543 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 EDDM3AQ14507 147 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 Q3ZCU0 254 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 Q8TCH9 128 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 RXFP4Q8TDU9 374 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 C5orf30Q96GV9 206 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 TMEM147Q9BVK8 224 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 RNF7Q9UBF6 113 aa12.45□□□□□ -0.42
COL9A1-208ENST00000489611 A0A087WWC5 75 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 MEX3AA1L020 520 aaKnown RBP12.44□□□□□ -0.42
COL9A1-208ENST00000489611 SNRNP70P08621 437 aaKnown RBP12.44□□□□□ -0.42
COL9A1-208ENST00000489611 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
COL9A1-208ENST00000489611 DUTP33316 252 aaKnown RBP12.44□□□□□ -0.42
COL9A1-208ENST00000489611 RAB5BP61020 215 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 GNB2P62879 340 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 CCL20P78556 96 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 TMEM108Q6UXF1 575 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 HAPLN4Q86UW8 402 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 MOGAT3Q86VF5 341 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 LRP11Q86VZ4 500 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 OR52E5Q8NH55 327 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 SDSLQ96GA7 329 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 OR4C12Q96R67 309 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 ABHD14AQ9BUJ0 271 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 RPRMQ9NS64 109 aa12.44□□□□□ -0.42
COL9A1-208ENST00000489611 B4DEV8 164 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 OR13C7P0DN81 318 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 PTAFRP25105 342 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 BRWD1-AS2P59051 145 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 ARL16Q0P5N6 197 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 ICAM4Q14773 271 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 MSMPQ1L6U9 139 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 SLC35E3Q7Z769 313 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 TPRX1Q8N7U7 411 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 RFESDQ8TAC1 157 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 CLCC1Q96S66 551 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 RARRES2Q99969 163 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 CISD1Q9NZ45 108 aaKnown RBP12.43□□□□□ -0.42
COL9A1-208ENST00000489611 PRELID1Q9Y255 219 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 KLF2Q9Y5W3 355 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-208ENST00000489611 LINC00473A8K010 186 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 ST8SIA5O15466 376 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 NDUFA2O43678 99 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 CRYBA1P05813 215 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 CD40P25942 277 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 MAS1LP35410 378 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 VWC2Q2TAL6 325 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 PDLIM3Q53GG5 364 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-208ENST00000489611 PRR30Q53SZ7 412 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-208ENST00000489611 ZNF787Q6DD87 383 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 ITLN1Q8WWA0 313 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 R3HDM4Q96D70 268 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 ZNF251Q9BRH9 671 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 NIPSNAP3BQ9BS92 247 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 RSG1Q9BU20 258 aa12.43□□□□□ -0.42
COL9A1-208ENST00000489611 LOC102723971A0A1B0GUV8 181 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 A0A1B0GV50 99 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 C1orf196B1AJZ1 125 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 SPRY3O43610 288 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 RBMXL2O75526 392 aaKnown RBP12.42□□□□□ -0.42
COL9A1-208ENST00000489611 LOXL3P58215 753 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 ERVK-16P61578 105 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 TNFAIP6P98066 277 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-208ENST00000489611 PNRC1Q12796 327 aaPredicted RBP12.42□□□□□ -0.42
COL9A1-208ENST00000489611 HAGHQ16775 308 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 OR2B11Q5JQS5 317 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 BTNL3Q6UXE8 466 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 RBMS3Q6XE24 437 aaKnown RBP12.42□□□□□ -0.42
COL9A1-208ENST00000489611 ADTRPQ96IZ2 230 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 CALYQ9NYX4 217 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 RFNGQ9Y644 331 aa12.42□□□□□ -0.42
COL9A1-208ENST00000489611 TRGV10A0A0A0MS01 117 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 IGHV3-43A0A0B4J1X8 118 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 CXorf65A6NEN9 183 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 C17orf112F2Z3M2 114 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 C16orf97H3BN30 126 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 CGB3P0DN86 165 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 CGB7P0DN87 165 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 IGHV3-43DP0DP04 118 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 BCL2P10415 239 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 IRF2P14316 349 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 EDDM3BP56851 147 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 RPRMLQ8N4K4 120 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 SNRNP40Q96DI7 357 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms