RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 GRPEL2Q8TAA5 225 aa11.53□□□□□ -0.56
CLDN11-209ENST00000489485 MARVELD1Q9BSK0 173 aa11.53□□□□□ -0.56
CLDN11-209ENST00000489485 GHITMQ9H3K2 345 aa11.53□□□□□ -0.56
CLDN11-209ENST00000489485 SLC2A9Q9NRM0 540 aa11.53□□□□□ -0.56
CLDN11-209ENST00000489485 ANK3Q12955 4377 aaKnown RBP11.52□□□□□ -0.56
CLDN11-209ENST00000489485 GPR31O00270 319 aa11.52□□□□□ -0.57
CLDN11-209ENST00000489485 PROP1O75360 226 aa11.52□□□□□ -0.57
CLDN11-209ENST00000489485 CTSDP07339 412 aaPredicted RBP11.52□□□□□ -0.57
CLDN11-209ENST00000489485 FBP1P09467 338 aa11.52□□□□□ -0.57
CLDN11-209ENST00000489485 TPTE2P1Q5T6R2 138 aa11.52□□□□□ -0.57
CLDN11-209ENST00000489485 CMTM1Q8IZ96 169 aa11.52□□□□□ -0.57
CLDN11-209ENST00000489485 C5orf30Q96GV9 206 aa11.52□□□□□ -0.57
CLDN11-209ENST00000489485 S1PR3Q99500 378 aa11.52□□□□□ -0.57
CLDN11-209ENST00000489485 MDFIC2A0A1B0GVS7 189 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 INMT-MINDY4F8WBC2 141 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 LY6LH3BQJ8 138 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 LINC00205P59089 165 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 SCGB2A2Q13296 93 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 DEFB112Q30KQ8 113 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 C9orf139Q6ZV77 190 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 SLC7A5P1Q8MH63 180 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 DYNAPQ8N1N2 210 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 BVESQ8NE79 360 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 FAM216AQ8WUB2 273 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 ST6GALNAC6Q969X2 333 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 AJUBAQ96IF1 538 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 CRLF1O75462 422 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 SLC22A5O76082 557 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 GAPDHP04406 335 aaKnown RBP11.51□□□□□ -0.57
CLDN11-209ENST00000489485 ZNF137PP52743 207 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 TGIF2LXQ8IUE1 241 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 RTN4IP1Q8WWV3 396 aaPredicted RBP11.51□□□□□ -0.57
CLDN11-209ENST00000489485 TMEM230Q96A57 120 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 AKR1E2Q96JD6 320 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 ZNF251Q9BRH9 671 aa11.51□□□□□ -0.57
CLDN11-209ENST00000489485 PGLYRP1O75594 196 aaPredicted RBP11.5□□□□□ -0.57
CLDN11-209ENST00000489485 TATDN3Q17R31 274 aa11.5□□□□□ -0.57
CLDN11-209ENST00000489485 CCDC144NLQ6NUI1 221 aa11.5□□□□□ -0.57
CLDN11-209ENST00000489485 ZNF833PQ6ZTB9 187 aa11.5□□□□□ -0.57
CLDN11-209ENST00000489485 ZDHHC16Q969W1 377 aa11.5□□□□□ -0.57
CLDN11-209ENST00000489485 CUBNO60494 3623 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 M0R1X1 148 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 VSIG10L2P0DP72 767 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 ARHGDIBP52566 201 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 C4orf46Q504U0 113 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 TMEM128Q5BJH2 165 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 MOB3BQ86TA1 216 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 TBC1D26Q86UD7 250 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 SLC25A42Q86VD7 318 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 OR51H1Q8NH63 302 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 GON7Q9BXV9 100 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 GAB2Q9UQC2 676 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 IGHV1-3A0A0C4DH29 117 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 TEX13DA0A0J9YY54 714 aaPredicted RBP11.49□□□□□ -0.57
CLDN11-209ENST00000489485 OOSP1A8MZH6 123 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 MPPED1O15442 326 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 TXNL1O43396 289 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 DHFRP00374 187 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 OR4E1P0C645 316 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 FAM157CP0CG43 387 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 VAMP1P23763 118 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 S100GP29377 79 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 RAB13P51153 203 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 ZNF816Q0VGE8 651 aaPredicted RBP11.49□□□□□ -0.57
CLDN11-209ENST00000489485 PPP1R1AQ13522 171 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 RBMS3Q6XE24 437 aaKnown RBP11.49□□□□□ -0.57
CLDN11-209ENST00000489485 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 CCDC71LQ8N9Z2 235 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.49□□□□□ -0.57
CLDN11-209ENST00000489485 ZBTB34Q8NCN2 500 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 ZNF48Q96MX3 618 aaPredicted RBP11.49□□□□□ -0.57
CLDN11-209ENST00000489485 MEGF9Q9H1U4 602 aa11.49□□□□□ -0.57
CLDN11-209ENST00000489485 RANGRFQ9HD47 186 aaPredicted RBP11.49□□□□□ -0.57
CLDN11-209ENST00000489485 LINC00473A8K010 186 aa11.48□□□□□ -0.57
CLDN11-209ENST00000489485 DUTP33316 252 aaKnown RBP11.48□□□□□ -0.57
CLDN11-209ENST00000489485 MECP2P51608 486 aaKnown RBP11.48□□□□□ -0.57
CLDN11-209ENST00000489485 RAG2P55895 527 aa11.48□□□□□ -0.57
CLDN11-209ENST00000489485 TAS2R31P59538 309 aa11.48□□□□□ -0.57
CLDN11-209ENST00000489485 RPL30P62888 115 aaKnown RBP11.48□□□□□ -0.57
CLDN11-209ENST00000489485 GLDNQ6ZMI3 551 aaPredicted RBP11.48□□□□□ -0.57
CLDN11-209ENST00000489485 SGPP2Q8IWX5 399 aa11.48□□□□□ -0.57
CLDN11-209ENST00000489485 OR52B4Q8NGK2 314 aa11.48□□□□□ -0.57
CLDN11-209ENST00000489485 RBMXL1Q96E39 390 aaKnown RBP11.48□□□□□ -0.57
CLDN11-209ENST00000489485 SSX3Q99909 188 aa11.48□□□□□ -0.57
CLDN11-209ENST00000489485 MRPL20Q9BYC9 149 aaKnown RBP11.48□□□□□ -0.57
CLDN11-209ENST00000489485 ALX4Q9H161 411 aaPredicted RBP11.48□□□□□ -0.57
CLDN11-209ENST00000489485 ALG5Q9Y673 324 aa11.48□□□□□ -0.57
CLDN11-209ENST00000489485 SETD2Q9BYW2 2564 aaPredicted RBP11.48□□□□□ -0.57
CLDN11-209ENST00000489485 IGHV3-72A0A0B4J1Y9 119 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 A0A0B4J293 547 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 A0A1W2PPI3 338 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 CRYM-AS1A6NIL9 109 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 TIMM23O14925 209 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 HLA-AP01891 365 aaKnown RBP11.47□□□□□ -0.57
CLDN11-209ENST00000489485 CD24P25063 80 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 BRS3P32247 399 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 RND3P61587 244 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 SUPT4H1P63272 117 aaKnown RBP11.47□□□□□ -0.57
CLDN11-209ENST00000489485 CD83Q01151 205 aa11.47□□□□□ -0.57
CLDN11-209ENST00000489485 DHODHQ02127 395 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms