RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 C4orf3Q8WVX3 66 aa19.48■□□□□ 0.71
HMGN1-217ENST00000489072 METTL1Q9UBP6 276 aaKnown RBP19.48■□□□□ 0.71
HMGN1-217ENST00000489072 APOA2P02652 100 aa19.47■□□□□ 0.71
HMGN1-217ENST00000489072 RPS16P62249 146 aaKnown RBP19.47■□□□□ 0.71
HMGN1-217ENST00000489072 ECSCRQ19T08 205 aa19.47■□□□□ 0.71
HMGN1-217ENST00000489072 PDPNQ86YL7 162 aa19.47■□□□□ 0.71
HMGN1-217ENST00000489072 H1FOOQ8IZA3 346 aaPredicted RBP19.47■□□□□ 0.71
HMGN1-217ENST00000489072 OR5H6Q8NGV6 325 aa19.47■□□□□ 0.71
HMGN1-217ENST00000489072 NUDCD2Q8WVJ2 157 aa19.47■□□□□ 0.71
HMGN1-217ENST00000489072 CLCC1Q96S66 551 aa19.47■□□□□ 0.71
HMGN1-217ENST00000489072 GINS4Q9BRT9 223 aa19.47■□□□□ 0.71
HMGN1-217ENST00000489072 TMEM235A6NFC5 223 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 SOX15O60248 233 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 RAB25P57735 213 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 EGFEM1PQ0D2K5 195 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 ZNF260Q3ZCT1 412 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 TMEM65Q6PI78 240 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 ZNF491Q8N8L2 437 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 GNB4Q9HAV0 340 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 TPSG1Q9NRR2 321 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 SLC35D1Q9NTN3 355 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 RHBDL2Q9NX52 303 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 A3GALT2U3KPV4 340 aa19.46■□□□□ 0.71
HMGN1-217ENST00000489072 SPDEFO95238 335 aa19.45■□□□□ 0.7
HMGN1-217ENST00000489072 FLYWCH2Q96CP2 140 aaKnown RBP19.45■□□□□ 0.7
HMGN1-217ENST00000489072 SLC25A38Q96DW6 304 aa19.45■□□□□ 0.7
HMGN1-217ENST00000489072 TSNAXQ99598 290 aaKnown RBP19.45■□□□□ 0.7
HMGN1-217ENST00000489072 ST6GALNAC5Q9BVH7 336 aa19.45■□□□□ 0.7
HMGN1-217ENST00000489072 NUBP2Q9Y5Y2 271 aa19.45■□□□□ 0.7
HMGN1-217ENST00000489072 K7EIL1 84 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 SSX5O60225 188 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 SCGNO76038 276 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 CA2P00918 260 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 RAB9AP51151 201 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 FHL3Q13643 280 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 IDNKQ5T6J7 187 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 UBE2E2Q96LR5 201 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 FAM103A1Q9BTL3 118 aaKnown RBP19.44■□□□□ 0.7
HMGN1-217ENST00000489072 MCRIP2Q9BUT9 160 aaKnown RBP19.44■□□□□ 0.7
HMGN1-217ENST00000489072 GPR61Q9BZJ8 451 aa19.44■□□□□ 0.7
HMGN1-217ENST00000489072 A0A1W2PN81 502 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 I3L521 148 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 SLC25A17O43808 307 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 IGLV2-23P01705 113 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 CHRNA7P36544 502 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 TGFBR1P36897 503 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 ZNF562Q6V9R5 426 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 ABHD5Q8WTS1 349 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 CASTOR1Q8WTX7 329 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 DCSTAMPQ9H295 470 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 FOXA2Q9Y261 457 aaPredicted RBP19.43■□□□□ 0.7
HMGN1-217ENST00000489072 VSIG4Q9Y279 399 aa19.43■□□□□ 0.7
HMGN1-217ENST00000489072 RBM7Q9Y580 266 aaKnown RBP19.43■□□□□ 0.7
HMGN1-217ENST00000489072 TNCP24821 2201 aa19.42■□□□□ 0.7
HMGN1-217ENST00000489072 WI2-2373I1.2A0A1W2PRP0 233 aa19.42■□□□□ 0.7
HMGN1-217ENST00000489072 SCAND1P57086 179 aa19.42■□□□□ 0.7
HMGN1-217ENST00000489072 PPP1R27Q86WC6 154 aa19.42■□□□□ 0.7
HMGN1-217ENST00000489072 BVESQ8NE79 360 aa19.42■□□□□ 0.7
HMGN1-217ENST00000489072 OR11H1Q8NG94 326 aa19.42■□□□□ 0.7
HMGN1-217ENST00000489072 OR5B12Q96R08 314 aa19.42■□□□□ 0.7
HMGN1-217ENST00000489072 ETV7Q9Y603 341 aa19.42■□□□□ 0.7
HMGN1-217ENST00000489072 GNG2P59768 71 aa19.41■□□□□ 0.7
HMGN1-217ENST00000489072 GNB1P62873 340 aa19.41■□□□□ 0.7
HMGN1-217ENST00000489072 SSBP2P81877 361 aaPredicted RBP19.41■□□□□ 0.7
HMGN1-217ENST00000489072 PITPNAQ00169 270 aa19.41■□□□□ 0.7
HMGN1-217ENST00000489072 RUNX1Q01196 453 aa19.41■□□□□ 0.7
HMGN1-217ENST00000489072 ASPHD1Q5U4P2 390 aa19.41■□□□□ 0.7
HMGN1-217ENST00000489072 DPF1Q92782 380 aa19.41■□□□□ 0.7
HMGN1-217ENST00000489072 J3QRK9 145 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 ARPC1BO15143 372 aaKnown RBP19.4■□□□□ 0.7
HMGN1-217ENST00000489072 CRYGBP07316 175 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 NFYAP23511 347 aaPredicted RBP19.4■□□□□ 0.7
HMGN1-217ENST00000489072 DUTP33316 252 aaKnown RBP19.4■□□□□ 0.7
HMGN1-217ENST00000489072 UNQ5815/PRO19632Q6UWF5 114 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 TCTEX1D1Q8N7M0 179 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 LFNGQ8NES3 379 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 TSPAN14Q8NG11 270 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 OR5M8Q8NGP6 311 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 DDB2Q92466 427 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 YIPF6Q96EC8 236 aa19.4■□□□□ 0.7
HMGN1-217ENST00000489072 TRAV18A0A075B6X5 111 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 A0A087WXM4 84 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 SRRM4A7MD48 611 aaKnown RBP19.39■□□□□ 0.69
HMGN1-217ENST00000489072 LINC00473A8K010 186 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 LGALS7P47929 136 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 LUMP51884 338 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-217ENST00000489072 TMEM267Q0VDI3 215 aaPredicted RBP19.39■□□□□ 0.69
HMGN1-217ENST00000489072 PJVKQ0ZLH3 352 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 AKIRIN2Q53H80 203 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 TMEM177Q53S58 311 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 CNIH2Q6PI25 160 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 ARPC1AQ92747 370 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 HARBI1Q96MB7 349 aa19.39■□□□□ 0.69
HMGN1-217ENST00000489072 TNFAIP8O95379 198 aa19.38■□□□□ 0.69
HMGN1-217ENST00000489072 CTXN2P0C2S0 81 aa19.38■□□□□ 0.69
HMGN1-217ENST00000489072 TAGLNQ01995 201 aaKnown RBP19.38■□□□□ 0.69
HMGN1-217ENST00000489072 COL7A1Q02388 2944 aa19.38■□□□□ 0.69
HMGN1-217ENST00000489072 FXYD3Q14802 87 aa19.38■□□□□ 0.69
HMGN1-217ENST00000489072 ACTBL2Q562R1 376 aa19.38■□□□□ 0.69
HMGN1-217ENST00000489072 OR1N2Q8NGR9 330 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms