RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 KDM5BQ9UGL1 1544 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 TRGV2A0A075B6R0 118 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 RFPL4AA6NLU0 287 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 OR11H12B2RN74 326 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 RFPL4AL1F8VTS6 287 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 MKRN2OSH3BPM6 223 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 CCRL2O00421 344 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 SLC17A3O00476 420 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 MRASO14807 208 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 AZIN1O14977 448 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 CETN3O15182 167 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 PFDN6O15212 129 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 TOX3O15405 576 aaPredicted RBP0.89□□□□□ -2.27
PTPN4-212ENST00000488896 STX10O60499 249 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 YEATS4O95619 227 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 IGHV1-69P01742 117 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 ORM1P02763 201 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 OCMP0CE72 109 aaPredicted RBP0.89□□□□□ -2.27
PTPN4-212ENST00000488896 BLVRAP53004 296 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 TAS2R45P59539 299 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 HPCAP84074 193 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 ZNF90Q03938 601 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 UAP1Q16222 522 aaPredicted RBP0.89□□□□□ -2.27
PTPN4-212ENST00000488896 C4orf26Q17RF5 130 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 CLEC12BQ2HXU8 276 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 TBC1D28Q2M2D7 210 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 HLA-DRB5Q30154 266 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 SDHAF4Q5VUM1 108 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 NAA40Q86UY6 237 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 FAM9CQ8IZT9 166 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 OR5L1Q8NGL2 311 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 OR11H2Q8NH07 326 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 STOML3Q8TAV4 291 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 C12orf43Q96C57 262 aaKnown RBP0.89□□□□□ -2.27
PTPN4-212ENST00000488896 PPCDCQ96CD2 204 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 CMTM5Q96DZ9 223 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 ZNF514Q96K75 400 aaPredicted RBP0.89□□□□□ -2.27
PTPN4-212ENST00000488896 SPZ1Q9BXG8 430 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 OR52A5Q9H2C5 316 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 FAM215AQ9Y5M1 114 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 GMEB1Q9Y692 573 aa0.89□□□□□ -2.27
PTPN4-212ENST00000488896 TMEM94Q12767 1356 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 IQCF5A8MTL0 148 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 A8MUN3 132 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 ZNF705FA8MVS1 300 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-212ENST00000488896 C2orf74A8MZ97 194 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 GOLGA8KD6RF30 607 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 GOLGA8MH3BSY2 632 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 SSNA1O43805 119 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 LINC00614P0C842 121 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 CXCL3P19876 107 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 CFL1P23528 166 aaKnown RBP0.88□□□□□ -2.27
PTPN4-212ENST00000488896 OR10J1P30954 320 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 CA7P43166 264 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 XCL1P47992 114 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 CD151P48509 253 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 RAP1GDS1P52306 607 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 SNAP25P60880 206 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 DAD1P61803 113 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 GNA12Q03113 381 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 TMEM267Q0VDI3 215 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-212ENST00000488896 EXOC3L4Q17RC7 722 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 AMTNQ6UX39 209 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 DRAM2Q6UX65 266 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 PLEKHG7Q6ZR37 379 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 HIST2H3AQ71DI3 136 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 COA5Q86WW8 74 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 OR7G1Q8NGA0 311 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 MIEN1Q9BRT3 115 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 TIPINQ9BVW5 301 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 NKX6-2Q9C056 277 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-212ENST00000488896 EIF5A2Q9GZV4 153 aaKnown RBP0.88□□□□□ -2.27
PTPN4-212ENST00000488896 NSRP1Q9H0G5 558 aaKnown RBP0.88□□□□□ -2.27
PTPN4-212ENST00000488896 PARVAQ9NVD7 372 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 EURLQ9NYK6 297 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 C15orf41Q9Y2V0 281 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 HDGFL3Q9Y3E1 203 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 PUS1Q9Y606 427 aaKnown RBP eCLIP0.88□□□□□ -2.27
PTPN4-212ENST00000488896 COL6A6A6NMZ7 2263 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 NAV1Q8NEY1 1877 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 NPATQ14207 1427 aa0.88□□□□□ -2.27
PTPN4-212ENST00000488896 ZFHX2Q9C0A1 2572 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-212ENST00000488896 PTPRSQ13332 1948 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 MYOFQ9NZM1 2061 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 RTTNQ86VV8 2226 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 CPAMD8Q8IZJ3 1885 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 TMSB15BA0A087X1C1 80 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 TRAV8-1A0A0A6YYK1 113 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 TRAV41A0A0B4J266 112 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 TINCRA0A1B0GVN0 87 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 FTCDNL1E5RQL4 147 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 COCHO43405 550 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 GSTZ1O43708 216 aaPredicted RBP0.87□□□□□ -2.27
PTPN4-212ENST00000488896 PSMG1O95456 288 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 TYMSP04818 313 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 CRYBA1P05813 215 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 CXCL2P19875 107 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 IFNGR2P38484 337 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 CCR2P41597 374 aa0.87□□□□□ -2.27
PTPN4-212ENST00000488896 CRATP43155 626 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms