RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 PLEKHA2Q9HB19 425 aa10.11□□□□□ -0.79
HDAC6-230ENST00000488543 UMAD1C9J7I0 102 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 IGLV2-14P01704 120 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 P2RY1P47900 373 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 EWSR1Q01844 656 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC6-230ENST00000488543 MUC15Q8N387 334 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 FAM24BQ8N5W8 94 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 OR13A1Q8NGR1 328 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 SNX22Q96L94 193 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 DIRC2Q96SL1 478 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 DCTN5Q9BTE1 182 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 SMCO4Q9NRQ5 59 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 USF3Q68DE3 2245 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 TANC2Q9HCD6 1990 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 CENPEQ02224 2701 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 C3orf85A0A1B0GTC6 90 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 OOEPA6NGQ2 149 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 H3BP45 60 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 ST8SIA3O43173 380 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 IGFBP2P18065 325 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 EPHA1P21709 976 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 GABRA2P47869 451 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 OR2B8PP59922 312 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 STUMQ69YW2 141 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 FAM53AQ6NSI3 398 aaPredicted RBP10.1□□□□□ -0.79
HDAC6-230ENST00000488543 LGI3Q8N145 548 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 OR10V1Q8NGI7 309 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 NANPQ8TBE9 248 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 MRGPRDQ8TDS7 321 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 GINS3Q9BRX5 216 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 ARV1Q9H2C2 271 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 KCNIP1Q9NZI2 227 aa10.1□□□□□ -0.79
HDAC6-230ENST00000488543 BORCS7-ASMTA0A0B4J1R7 106 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 ADAM20O43506 726 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 HBZP02008 142 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 PF4V1P10720 104 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 MEOX2P50222 304 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 OR4D5Q8NGN0 318 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 LYPD6BQ8NI32 183 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-230ENST00000488543 UBE2J1Q9Y385 318 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-230ENST00000488543 PUS1Q9Y606 427 aaKnown RBP eCLIP10.09□□□□□ -0.79
HDAC6-230ENST00000488543 DSCAML1Q8TD84 2053 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 TENM4Q6N022 2769 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 C15orf65H3BRN8 121 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 K7N7A8 449 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 PGLYRP1O75594 196 aaPredicted RBP10.09□□□□□ -0.79
HDAC6-230ENST00000488543 TMEM50AO95807 157 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 SELLP14151 372 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 EDDM3AQ14507 147 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 GNMTQ14749 295 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 LURAP1Q96LR2 239 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 TOLLIPQ9H0E2 274 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 TMEM222Q9H0R3 208 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 DYNLRB1Q9NP97 96 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 PPP1R3CQ9UQK1 317 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 KPTNQ9Y664 436 aa10.09□□□□□ -0.79
HDAC6-230ENST00000488543 CELSR2Q9HCU4 2923 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 CSMD2Q7Z408 3487 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 MGST3O14880 152 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 CEACAM6P40199 344 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 HAGHQ16775 308 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 DUX4L9Q6RFH8 374 aaPredicted RBP10.08□□□□□ -0.8
HDAC6-230ENST00000488543 ODF3L1Q8IXM7 274 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 ZNRF1Q8ND25 227 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 OR52L2PQ8NGH6 319 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 SDSLQ96GA7 329 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 TMEM56Q96MV1 263 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 TMEM56-RWDD3S4R434 201 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 VPS13CQ709C8 3753 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 ODAMA1E959 279 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 ZNF727A8MUV8 499 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 HSPA12AO43301 675 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 SOD3P08294 240 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 SEC11BP0C7V7 166 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 ATP6V0CP27449 155 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 SSTR5P35346 364 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 EFNB3Q15768 340 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 CR1LQ2VPA4 569 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 ANKRD39Q53RE8 183 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 TEX36Q5VZQ5 186 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 OR2C3Q8N628 320 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 OR2G3Q8NGZ4 309 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 GALMQ96C23 342 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 GAFA1Q96PS6 74 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 POMT1Q9Y6A1 747 aa10.08□□□□□ -0.8
HDAC6-230ENST00000488543 WNT2P09544 360 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 TNFRSF1AP19438 455 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 UCP1P25874 307 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 DYNLT3P51808 116 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 RAB5BP61020 215 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 ZNF695Q8IW36 515 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 SELENOHQ8IZQ5 122 aaKnown RBP10.07□□□□□ -0.8
HDAC6-230ENST00000488543 DEFB108BQ8NET1 73 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 A0A0G2JRQ6 117 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 C1orf196B1AJZ1 125 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 H0Y980 276 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 IL2RGP31785 369 aa10.07□□□□□ -0.8
HDAC6-230ENST00000488543 NKX2-1P43699 371 aaPredicted RBP10.07□□□□□ -0.8
HDAC6-230ENST00000488543 SULT1A1P50225 295 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms