RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 S100A16Q96FQ6 103 aaKnown RBP9.58□□□□□ -0.88
SDC3-204ENST00000487984 DIRAS2Q96HU8 199 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 B9D2Q9BPU9 175 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 AGMATQ9BSE5 352 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 URM1Q9BTM9 101 aaKnown RBP9.58□□□□□ -0.88
SDC3-204ENST00000487984 GNB4Q9HAV0 340 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 PIPOXQ9P0Z9 390 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 OR1A1Q9P1Q5 309 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 KIAA1456Q9P272 454 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 ZMAT5Q9UDW3 170 aaKnown RBP9.58□□□□□ -0.88
SDC3-204ENST00000487984 RAB22AQ9UL26 194 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 DNAH9Q9NYC9 4486 aa9.58□□□□□ -0.88
SDC3-204ENST00000487984 TRAV41A0A0B4J266 112 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 H0YJW9 148 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 ITGB1BP1O14713 200 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 TPPPO94811 219 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 IGLV1-40P01703 118 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 RAB6AP20340 208 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 PTBP1P26599 531 aaKnown RBP eCLIP9.57□□□□□ -0.88
SDC3-204ENST00000487984 TNFSF8P32971 234 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 TMEM50BP56557 158 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 CLDN12P56749 244 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 HLA-DRB3P79483 266 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 CD69Q07108 199 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 C2orf76Q3KRA6 126 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 C9orf66Q5T8R8 295 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 TMEM65Q6PI78 240 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 ZNF491Q8N8L2 437 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 MINDY2Q8NBR6 621 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 OR11H1Q8NG94 326 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 ARHGAP5-AS1Q96IT6 56 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 ABHD14BQ96IU4 210 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 UBE2E2Q96LR5 201 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 FBXL15Q9H469 300 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 C12orf4Q9NQ89 552 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 DIABLOQ9NR28 239 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 HSF4Q9ULV5 492 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 FBXO7Q9Y3I1 522 aa9.57□□□□□ -0.88
SDC3-204ENST00000487984 A0A0A6YYH2 397 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 FABP12A6NFH5 140 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 OR5H14A6NHG9 310 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 A6NJ64 397 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 SEC14L6B5MCN3 397 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 I3L521 148 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 RRHO14718 337 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 HPGDSO60760 199 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 RAMP3O60896 148 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 SCTP09683 121 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 ZBTB25P24278 435 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 CEACAM6P40199 344 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 ETV6P41212 452 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 VEGFCP49767 419 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 RAB9AP51151 201 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 GNB1P62873 340 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 RUNX1Q01196 453 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 DCTN2Q13561 401 aaKnown RBP9.56□□□□□ -0.88
SDC3-204ENST00000487984 ECSCRQ19T08 205 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 C19orf54Q5BKX5 351 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 ASPHD1Q5U4P2 390 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 LAX1Q8IWV1 398 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 OR5B12Q96R08 314 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 PECRQ9BY49 303 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 C11orf54Q9H0W9 315 aaPredicted RBP9.56□□□□□ -0.88
SDC3-204ENST00000487984 Q9N2K0 584 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 RHBDL2Q9NX52 303 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 MGAT4AQ9UM21 535 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 VSIG4Q9Y279 399 aa9.56□□□□□ -0.88
SDC3-204ENST00000487984 A0A0B4J203 849 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 IGKV1-6A0A0C4DH72 117 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 FCN1O00602 326 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 LDLRAD4O15165 306 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 HSPA12AO43301 675 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 SOX15O60248 233 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 OR8U8P0C7N1 319 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 MC5RP33032 325 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 CRIP2P52943 208 aaPredicted RBP9.55□□□□□ -0.88
SDC3-204ENST00000487984 CX3CL1P78423 397 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 PITPNAQ00169 270 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 PLA2G7Q13093 441 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 PLGLAQ15195 96 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 ZNF260Q3ZCT1 412 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 PLAC9Q5JTB6 97 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 ZNF660Q6AZW8 331 aaPredicted RBP9.55□□□□□ -0.88
SDC3-204ENST00000487984 CCDC190Q86UF4 302 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 OR56B1Q8NGI3 324 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 OR5AN1Q8NGI8 311 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 OR1N2Q8NGR9 330 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 OR5H6Q8NGV6 325 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 PRR25Q96S07 402 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 CMSS1Q9BQ75 279 aaKnown RBP9.55□□□□□ -0.88
SDC3-204ENST00000487984 MIXL1Q9H2W2 232 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 GHITMQ9H3K2 345 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 EXTL2Q9UBQ6 330 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 RNF150Q9ULK6 438 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 WASHC3Q9Y3C0 194 aa9.55□□□□□ -0.88
SDC3-204ENST00000487984 TMEM272A0A1B0GTI8 110 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 H7C2Y5 167 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 PROP1O75360 226 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 RBBP9O75884 186 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms