RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 PTBP1P26599 531 aaKnown RBP eCLIP4.4□□□□□ -1.714e-10■■■■■ 37.6
RAB3GAP1-204ENST00000487003 NKX2-1P43699 371 aaPredicted RBP4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 IFITM3Q01628 133 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 AKR1C1Q04828 323 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 DHRS2Q13268 280 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 MORN2Q502X0 79 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ZNF626Q68DY1 528 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 HCP5Q6MZN7 132 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 LYZL2Q7Z4W2 148 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ZNF709Q8N972 641 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 MISP3Q96FF7 219 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 C1orf147Q96MC9 270 aaPredicted RBP4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 NAA60Q9H7X0 242 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 VSIG4Q9Y279 399 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 HSPB11Q9Y547 144 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CHD3Q12873 2000 aaKnown RBP4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 FLNAP21333 2647 aaKnown RBP4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 GCN1Q92616 2671 aaKnown RBP4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 C2CD3Q4AC94 2353 aa4.4□□□□□ -1.71
RAB3GAP1-204ENST00000487003 IGKV3-7A0A075B6H7 116 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 MDFIC2A0A1B0GVS7 189 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ZNF737O75373 536 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 NDUFB6O95139 128 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 MELTFP08582 738 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SAA2P0DJI9 122 aaPredicted RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 F2RP25116 425 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ECI1P42126 302 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 RPL23AP62750 156 aaKnown RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SCGB2A2Q13296 93 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ASAH1Q13510 395 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 OVCH2Q7RTZ1 564 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 BIVMQ86UB2 503 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 FAM89BQ8N5H3 189 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 Q8TCH9 128 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SCGB1C1Q8TD33 95 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ZNF431Q8TF32 576 aaPredicted RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ACY3Q96HD9 319 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ARL6Q9H0F7 186 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 TAS2R3Q9NYW6 316 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 TRIM77I1YAP6 450 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 S1PR2O95136 353 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SNRNP70P08621 437 aaKnown RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 OR13C7P0DN81 318 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 THBS3P49746 956 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ERVK11-1P61568 191 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ERHP84090 104 aaKnown RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 KLF9Q13886 244 aaPredicted RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 KRTAP27-1Q3LI81 207 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CLEC18BQ6UXF7 455 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 HEPN1Q6WQI6 88 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CENPVQ7Z7K6 275 aaPredicted RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CIARTQ8N365 385 aaPredicted RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 C18orf12Q96KH6 178 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 PBDC1Q9BVG4 233 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 PLEKHA3Q9HB20 300 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 RHOFQ9HBH0 211 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 A0A0A6YYJ9 748 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 TRAV20A0A0B4J274 112 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 IGHV2-70DA0A0C4DH43 119 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 C17orf98A8MV24 154 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 NPFFO15130 113 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 PRAF2O60831 178 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CST7O76096 145 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 IGHV4-38-2P0DP08 117 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 NQO2P16083 231 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ZNF529Q6P280 563 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 TMEM65Q6PI78 240 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 LYG2Q86SG7 212 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 STX12Q86Y82 276 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 MRPL41Q8IXM3 137 aaKnown RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ADTRPQ96IZ2 230 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 TSNAXQ99598 290 aaKnown RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 HSD17B10Q99714 261 aaKnown RBP4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SDHAF2Q9NX18 166 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 PITPNC1Q9UKF7 332 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 WASHC3Q9Y3C0 194 aa4.39□□□□□ -1.71
RAB3GAP1-204ENST00000487003 A0A0U1RQK1 487 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 KANTRA0A1W2PQU2 76 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ZNF320A2RRD8 509 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 PGLYRP1O75594 196 aaPredicted RBP4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CTSDP07339 412 aaPredicted RBP4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SRPXP78539 464 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 QRFPP83859 136 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SSBP1Q04837 148 aaKnown RBP4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 DIAPH2-AS1Q14236 149 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CT45A1Q5HYN5 189 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 GGNBP1Q5YKI7 109 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 DHRS7BQ6IAN0 325 aaPredicted RBP4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 UNQ5815/PRO19632Q6UWF5 114 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 ZNF645Q8N7E2 425 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 OR5M8Q8NGP6 311 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CT45A3Q8NHU0 189 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 LRRC20Q8TCA0 184 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 C20orf24Q9BUV8 137 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 RANGRFQ9HD47 186 aaPredicted RBP4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 UNC79Q9P2D8 2635 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 LDLRAD4O15165 306 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 CYB5BO43169 146 aa4.38□□□□□ -1.71
RAB3GAP1-204ENST00000487003 SOX15O60248 233 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms