RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 HGFACQ04756 655 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 HABP2Q14520 560 aaPredicted RBP7.57□□□□□ -1.2
COL12A1-208ENST00000486533 KHDC3LQ587J8 217 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 ZNF506Q5JVG8 444 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 SLC35E3Q7Z769 313 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 TMEM252Q8N6L7 170 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 OR10J5Q8NHC4 309 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 HPSE2Q8WWQ2 592 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 SLAMF9Q96A28 289 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 TVP23CQ96ET8 276 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 TP53RKQ96S44 253 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 CABLES2Q9BTV7 478 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 C11orf1Q9H5F2 150 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 LIN7CQ9NUP9 197 aaKnown RBP7.57□□□□□ -1.2
COL12A1-208ENST00000486533 POLDIP2Q9Y2S7 368 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 ATRQ13535 2644 aa7.57□□□□□ -1.2
COL12A1-208ENST00000486533 A0A096LPE4 126 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 A0A1W2PPZ6 126 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 FAM90A26D6RGX4 464 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 AP4M1O00189 453 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 LY86O95711 162 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 BCL3P20749 454 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 ID3Q02535 119 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 NHLH2Q02577 135 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 TNP2Q05952 138 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 DMRTC1Q5HYR2 192 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 C11orf71Q6IPW1 123 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 CLEC2AQ6UVW9 174 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 H1FOOQ8IZA3 346 aaPredicted RBP7.56□□□□□ -1.2
COL12A1-208ENST00000486533 OR1K1Q8NGR3 316 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 OR5C1Q8NGR4 320 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 OR13D1Q8NGV5 346 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 OR11L1Q8NGX0 322 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 PINX1Q96BK5 328 aaKnown RBP7.56□□□□□ -1.2
COL12A1-208ENST00000486533 PSMG3Q9BT73 122 aaPredicted RBP7.56□□□□□ -1.2
COL12A1-208ENST00000486533 RTL8AQ9BWD3 113 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 PARD6GQ9BYG4 376 aaPredicted RBP7.56□□□□□ -1.2
COL12A1-208ENST00000486533 WFDC1Q9HC57 220 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 OBP2BQ9NPH6 170 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 FBXO7Q9Y3I1 522 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 OR2W1Q9Y3N9 320 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 MMP24Q9Y5R2 645 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 WSB1Q9Y6I7 421 aa7.56□□□□□ -1.2
COL12A1-208ENST00000486533 IGSF23A1L1A6 192 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 C5orf49A4QMS7 147 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 FAM24AA6NFZ4 105 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 CD300LBA8K4G0 201 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 J3QT63 122 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 F2RP25116 425 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 S100PP25815 95 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 GPM6AP51674 278 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 UBE2KP61086 200 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 SNRPEP62304 92 aaKnown RBP7.55□□□□□ -1.2
COL12A1-208ENST00000486533 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
COL12A1-208ENST00000486533 NMSQ5H8A3 153 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 CALHM1Q8IU99 346 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 GAPTQ8N292 157 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 ZBTB34Q8NCN2 500 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 C2CD4CQ8TF44 421 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 DYRK2Q92630 601 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 P2RX4Q99571 388 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 TMPRSS5Q9H3S3 457 aa7.55□□□□□ -1.2
COL12A1-208ENST00000486533 IGHV4-30-2A0A087WSY4 118 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 IGHV1-18A0A0C4DH31 117 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 A0A1W2PPH5 198 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 SOX15O60248 233 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 CRYAAP02489 173 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 SELEP16581 610 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 CCNOP22674 350 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 APOBEC3AP31941 199 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-208ENST00000486533 DYNLT3P51808 116 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 CD81P60033 236 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 SERF2P84101 59 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 MSMO1Q15800 293 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 IGSF11Q5DX21 431 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-208ENST00000486533 ZNF880Q6PDB4 577 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 ZNF818PQ6ZRF7 136 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 PRIMA1Q86XR5 153 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 ZFP82Q8N141 532 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 FAM58AQ8N1B3 248 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 ZNF525Q8N782 197 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 OR10V1Q8NGI7 309 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 BCL2L2Q92843 193 aaPredicted RBP7.54□□□□□ -1.2
COL12A1-208ENST00000486533 SH3BGRL3Q9H299 93 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 ZDHHC8Q9ULC8 765 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 PUS1Q9Y606 427 aaKnown RBP eCLIP7.54□□□□□ -1.2
COL12A1-208ENST00000486533 CHD3Q12873 2000 aaKnown RBP7.54□□□□□ -1.2
COL12A1-208ENST00000486533 COL6A5A8TX70 2615 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 ARFGEF3Q5TH69 2177 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 DNHD1Q96M86 4753 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 A6NLC8 198 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 C9JQL5 133 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 HSD17B6O14756 317 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 CRLF1O75462 422 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 EIF3GO75821 320 aaKnown RBP eCLIP7.54□□□□□ -1.2
COL12A1-208ENST00000486533 SRP19P09132 144 aaKnown RBP7.54□□□□□ -1.2
COL12A1-208ENST00000486533 CECR9P0C854 216 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms