RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PLPPR2Q96GM1 343 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 UQCC1Q9NVA1 299 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 DCAF16Q9NXF7 216 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 GAB2Q9UQC2 676 aa16.85■□□□□ 0.29
HPS3-206ENST00000486530 TRAV38-1A0A0B4J264 116 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 ZNF729A6NN14 1252 aaPredicted RBP16.84■□□□□ 0.29
HPS3-206ENST00000486530 CCL21O00585 134 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 FBXL19-AS1Q494R0 122 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 C10orf91Q5T1B1 145 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 TCF23Q7RTU1 214 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 CORO2AQ92828 525 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 ABHD14AQ9BUJ0 271 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 RBKSQ9H477 322 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 TMEM231Q9H6L2 316 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 PROP1O75360 226 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 IFNA5P01569 189 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 ADCYAP1P18509 176 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 HBG1P69891 147 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 HBG2P69892 147 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 NCR3LG1Q68D85 454 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 LINC00574Q9H8X3 128 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 COQ3Q9NZJ6 369 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 CARHSP1Q9Y2V2 147 aaKnown RBP16.84■□□□□ 0.29
HPS3-206ENST00000486530 SPTA1P02549 2419 aa16.84■□□□□ 0.29
HPS3-206ENST00000486530 MARCH11A6NNE9 402 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 F8W036 122 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 RNASEK-C17orf49H0YIS7 233 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 M0R1X1 148 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 AGPAT2O15120 278 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 RBFOX2O43251 390 aaKnown RBP eCLIP16.83■□□□□ 0.28
HPS3-206ENST00000486530 C1QL1O75973 258 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 CD5P06127 495 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 CHRNB4P30926 498 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 ZNF134P52741 427 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 ZCCHC24Q8N2G6 241 aaKnown RBP16.83■□□□□ 0.28
HPS3-206ENST00000486530 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.83■□□□□ 0.28
HPS3-206ENST00000486530 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.83■□□□□ 0.28
HPS3-206ENST00000486530 RNASE6Q93091 150 aaKnown RBP16.83■□□□□ 0.28
HPS3-206ENST00000486530 SEC11CQ9BY50 192 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 FAM96BQ9Y3D0 163 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 ATRXP46100 2492 aa16.83■□□□□ 0.28
HPS3-206ENST00000486530 E7EQL1 145 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 HPRT1P00492 218 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 METTL15P1P0C7V9 234 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 KIR2DS2P43631 304 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 FHITP49789 147 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 DVL1P1P54792 670 aaPredicted RBP16.82■□□□□ 0.28
HPS3-206ENST00000486530 LINC00205P59089 165 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 BTN1A1Q13410 526 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 SVBPQ8N300 66 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 FAM213BQ8TBF2 198 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 R3HDM4Q96D70 268 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 DYNLRB1Q9NP97 96 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 IDI2-AS1Q9NZ38 188 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 TMEM178BH3BS89 294 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 TMPRSS2O15393 492 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 FCGR3BO75015 233 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 CD3EP07766 207 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 SNCAP37840 140 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 RPL39P5Q59GN2 51 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 SPANXN5Q5MJ07 72 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 NDRG3Q9UGV2 375 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 PRELID3BQ9Y3B1 194 aa16.82■□□□□ 0.28
HPS3-206ENST00000486530 PPIAL4EA0A075B759 164 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 hADV38S2A0JD32 116 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 FAM90A9PA6NNJ1 464 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 PPIAL4DF5H284 164 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 SLC31A2O15432 143 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 PPIAL4FP0DN26 164 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 SLC25A24Q6NUK1 477 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 ATRAIDQ6UW56 229 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 LFNGQ8NES3 379 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 NKX6-2Q9C056 277 aaPredicted RBP16.81■□□□□ 0.28
HPS3-206ENST00000486530 MS4A5Q9H3V2 200 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 PPIAL4AQ9Y536 164 aa16.81■□□□□ 0.28
HPS3-206ENST00000486530 TPRP12270 2363 aaKnown RBP16.81■□□□□ 0.28
HPS3-206ENST00000486530 HCFC1P51610 2035 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.8■□□□□ 0.28
HPS3-206ENST00000486530 FAM90A27PA6NNH2 459 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 IGHV3-7P01780 117 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 APOBEC3AP31941 199 aaPredicted RBP16.8■□□□□ 0.28
HPS3-206ENST00000486530 ARHGDIBP52566 201 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 ADORA2A-AS1P86434 159 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 RUNX1Q01196 453 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 EFNB3Q15768 340 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 CT45A1Q5HYN5 189 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 TMEM14EPQ6UXP3 125 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 LILRB2Q8N423 598 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 ZNF525Q8N782 197 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 CT45A3Q8NHU0 189 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 CIB3Q96Q77 187 aaPredicted RBP16.8■□□□□ 0.28
HPS3-206ENST00000486530 TMEM106BQ9NUM4 274 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 SLC25A10Q9UBX3 287 aaPredicted RBP16.8■□□□□ 0.28
HPS3-206ENST00000486530 LINC00312Q9Y6C7 94 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 NDUFB7P17568 137 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 MEF2CQ06413 473 aaPredicted RBP16.8■□□□□ 0.28
HPS3-206ENST00000486530 ARL16Q0P5N6 197 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 HAPLN4Q86UW8 402 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 S1PR3Q99500 378 aa16.8■□□□□ 0.28
HPS3-206ENST00000486530 RFNGQ9Y644 331 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms