RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 UBQLN2Q9UHD9 624 aa12.01□□□□□ -0.49
POLR2J3-204ENST00000486319 NSG2Q9Y328 171 aa12.01□□□□□ -0.49
POLR2J3-204ENST00000486319 POMT1Q9Y6A1 747 aa12.01□□□□□ -0.49
POLR2J3-204ENST00000486319 A0A1B0GU03 582 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 IGHV2-70P01814 119 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 NKX2-1P43699 371 aaPredicted RBP12□□□□□ -0.49
POLR2J3-204ENST00000486319 UBA52P62987 128 aaKnown RBP12□□□□□ -0.49
POLR2J3-204ENST00000486319 EXOSC2Q13868 293 aaKnown RBP12□□□□□ -0.49
POLR2J3-204ENST00000486319 Q3ZCU0 254 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 FGFRL1Q8N441 504 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 TCTEX1D2Q8WW35 142 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 H1FXQ92522 213 aaKnown RBP12□□□□□ -0.49
POLR2J3-204ENST00000486319 FAM168AQ92567 244 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 RAB39BQ96DA2 213 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 C5orf30Q96GV9 206 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 ZNF714Q96N38 554 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 ARPC5LQ9BPX5 153 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 ABHD14AQ9BUJ0 271 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 PLEKHA2Q9HB19 425 aa12□□□□□ -0.49
POLR2J3-204ENST00000486319 IGHV4-30-2A0A087WSY4 118 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 LYNX1G3V0Z9 82 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 ATP6V1G1O75348 118 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 IGKV1-39P01597 117 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 IGKV1D-39P04432 117 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 LYNX1P0DP58 116 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 DAOP14920 347 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 NFYBP25208 207 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 LPAR6P43657 344 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 AKR1C2P52895 323 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 RPL30P62888 115 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 TMEM200BQ69YZ2 307 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 BTNL3Q6UXE8 466 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 MAPK1IP1LQ8NDC0 245 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 CD300LFQ8TDQ1 290 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 RRNAD1Q96FB5 475 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 TIMD4Q96H15 378 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 IFI27L2Q9H2X8 130 aa11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 RPUSD1Q9UJJ7 312 aaKnown RBP11.99□□□□□ -0.49
POLR2J3-204ENST00000486319 ZFHX3Q15911 3703 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 TRBV23-1A0A0A0MS06 115 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 GPR37O15354 613 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 FCN3O75636 299 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 LY6G6DO95868 133 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 CFDP00746 253 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 PVALBP20472 110 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 PDLIM4P50479 330 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 ZNF134P52741 427 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 ZNF273Q14593 569 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 HEPN1Q6WQI6 88 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 Q71RC1 249 aaPredicted RBP11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 FAM219AQ8IW50 185 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 SPAG16Q8N0X2 631 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 RAB1CQ92928 201 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 GPR146Q96CH1 333 aa11.98□□□□□ -0.49
POLR2J3-204ENST00000486319 F5H0A9 414 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 RAB29O14966 203 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 HKR1P10072 659 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 RPL12P30050 165 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 DUTP33316 252 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 HTR2BP41595 481 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 P2RY1P47900 373 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 ID3Q02535 119 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 CT45A1Q5HYN5 189 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 PRAMEF5Q5TYX0 476 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 ZNF439Q8NDP4 499 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 CT45A3Q8NHU0 189 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 C10orf105Q8TEF2 133 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 ZNF471Q9BX82 626 aaPredicted RBP11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 ZC4H2Q9NQZ6 224 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 RCL1Q9Y2P8 373 aaKnown RBP11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 MMP24Q9Y5R2 645 aa11.97□□□□□ -0.49
POLR2J3-204ENST00000486319 MSGN1A6NI15 193 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 LINC00473A8K010 186 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 TAAR5O14804 337 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 KCNAB3O43448 404 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 PITX3O75364 302 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 IGKV1-5P01602 117 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 MMP9P14780 707 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 SLC25A16P16260 332 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 TMEM155Q4W5P6 130 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 GPR157Q5UAW9 335 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 OR8H3Q8N146 312 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 SCARB1Q8WTV0 552 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 ST8SIA2Q92186 375 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 CHODLQ9H9P2 273 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 MIOXQ9UGB7 285 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 PRELID3BQ9Y3B1 194 aa11.96□□□□□ -0.49
POLR2J3-204ENST00000486319 A0A0G2JRQ6 117 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 C17orf98A8MV24 154 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 M0R1X1 148 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 NDUFS8O00217 210 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 WRBO00258 174 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 SLC31A2O15432 143 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 RAMP3O60896 148 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 PROP1O75360 226 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 MMP23AO75900 390 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 SPDEFO95238 335 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 IGHV3-7P01780 117 aa11.96□□□□□ -0.5
POLR2J3-204ENST00000486319 CCL3L1P16619 93 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms