RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 NIPBLQ6KC79 2804 aaeCLIP4.53□□□□□ -1.68
COPS3-208ENST00000486032 IGHV1-3A0A0C4DH29 117 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 BTBD17A6NE02 478 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 CENPXA8MT69 81 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 LY6LH3BQJ8 138 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 H7C2Y5 167 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 TIMM23O14925 209 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 HOXA3O43365 443 aaPredicted RBP4.53□□□□□ -1.68
COPS3-208ENST00000486032 IGKV1D-33P01593 117 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 IGKV1-33P01594 117 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 IGHV4-59P01825 116 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 CD74P04233 296 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 SNRNP70P08621 437 aaKnown RBP4.53□□□□□ -1.68
COPS3-208ENST00000486032 ZNF735P0CB33 412 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 FAM157CP0CG43 387 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 BRS3P32247 399 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 CCR6P51684 374 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 ARHGDIBP52566 201 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 BPIFB3P59826 476 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 SCGB2A2Q13296 93 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 KLF9Q13886 244 aaPredicted RBP4.53□□□□□ -1.68
COPS3-208ENST00000486032 LRRC75BQ2VPJ9 315 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 ABCA11PQ4W5N1 156 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 VAX1Q5SQQ9 334 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 CCDC144NLQ6NUI1 221 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 C16orf87Q6PH81 154 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 IDO2Q6ZQW0 420 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 ZNF818PQ6ZRF7 136 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 TMEM219Q86XT9 240 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 ODF3L1Q8IXM7 274 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 ZNF645Q8N7E2 425 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 OR51H1Q8NH63 302 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 MARCH1Q8TCQ1 289 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 TCTEX1D2Q8WW35 142 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 GIMAP1Q8WWP7 306 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 RTN4IP1Q8WWV3 396 aaPredicted RBP4.53□□□□□ -1.68
COPS3-208ENST00000486032 MOB3AQ96BX8 217 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 C5orf30Q96GV9 206 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 AJUBAQ96IF1 538 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 NABP2Q9BQ15 211 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 CCDC32Q9BV29 185 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 SDHAF2Q9NX18 166 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 SCP2D1Q9UJQ7 156 aa4.53□□□□□ -1.68
COPS3-208ENST00000486032 RBMX2Q9Y388 322 aaKnown RBP4.53□□□□□ -1.68
COPS3-208ENST00000486032 A0A1W2PPI3 338 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 DNAJC9-AS1A6NH13 148 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 NCBP2LA6PVI3 153 aaKnown RBP4.52□□□□□ -1.69
COPS3-208ENST00000486032 GPR31O00270 319 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 ITGB1BP1O14713 200 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 LYRM1O43325 122 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 TCF21O43680 179 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 FCGR3BO75015 233 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 PROP1O75360 226 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 UPK1BO75841 260 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 APOA2P02652 100 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 RLN1P04808 185 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 CT45A6P0DMU7 189 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 CT45A5P0DMU8 189 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 CT45A7P0DMV0 189 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 TMEM11P17152 192 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 TBPP20226 339 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 GNRHRP30968 328 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 RPL30P62888 115 aaKnown RBP4.52□□□□□ -1.69
COPS3-208ENST00000486032 IFITM3Q01628 133 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 ZNF816Q0VGE8 651 aaPredicted RBP4.52□□□□□ -1.69
COPS3-208ENST00000486032 LY6G6FQ5SQ64 297 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 AADACL3Q5VUY0 350 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 ZNF660Q6AZW8 331 aaPredicted RBP4.52□□□□□ -1.69
COPS3-208ENST00000486032 DHRS11Q6UWP2 260 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 Q6YL49 198 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 LINC00299Q6ZSB3 139 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 ZNF833PQ6ZTB9 187 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 C9orf139Q6ZV77 190 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 KCTD9Q7L273 389 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 TMED4Q7Z7H5 227 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 OR8H3Q8N146 312 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 ARRDC1Q8N5I2 433 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 C8orf31Q8N9H6 132 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 ZNF383Q8NA42 475 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 POC5Q8NA72 575 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 BVESQ8NE79 360 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 OR13C8Q8NGS7 320 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 TERB2Q8NHR7 220 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 TAF15Q92804 592 aaKnown RBP eCLIP4.52□□□□□ -1.69
COPS3-208ENST00000486032 BORCS5Q969J3 196 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 ST6GALNAC6Q969X2 333 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 FANCD2OSQ96PS1 177 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 PRRT1Q99946 306 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 AGMATQ9BSE5 352 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 TOLLIPQ9H0E2 274 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 MEGF9Q9H1U4 602 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 DPAGT1Q9H3H5 408 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 BEX1Q9HBH7 125 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 SLC35D1Q9NTN3 355 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 COPZ2Q9P299 210 aa4.52□□□□□ -1.69
COPS3-208ENST00000486032 ZNF107Q9UII5 783 aaPredicted RBP4.52□□□□□ -1.69
COPS3-208ENST00000486032 C14orf166Q9Y224 244 aaKnown RBP4.52□□□□□ -1.69
COPS3-208ENST00000486032 TEX13DA0A0J9YY54 714 aaPredicted RBP4.51□□□□□ -1.69
COPS3-208ENST00000486032 NAP1L6A6NFF2 107 aa4.51□□□□□ -1.69
COPS3-208ENST00000486032 SH2D7A6NKC9 451 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms