RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 GHITMQ9H3K2 345 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 SESN1Q9Y6P5 492 aa13.76□□□□□ -0.21
VIM-205ENST00000485947 hCG_2014768A0A024R1R8 64 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 A0A087X0M5 115 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 A0A1B0GX30 115 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 TSPAN9O75954 239 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 IGHV1-8P0DP01 117 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 VSIG10L2P0DP72 767 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 NFYBP25208 207 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 GNRHRP30968 328 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 C4orf46Q504U0 113 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 DHRS7BQ6IAN0 325 aaPredicted RBP13.75□□□□□ -0.21
VIM-205ENST00000485947 CMTM1Q8IZ96 169 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 C8orf31Q8N9H6 132 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 ADAD2Q8NCV1 583 aaKnown RBP13.75□□□□□ -0.21
VIM-205ENST00000485947 BVESQ8NE79 360 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 OR2AK2Q8NG84 335 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 WFDC12Q8WWY7 111 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 TMEM230Q96A57 120 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 PARP12Q9H0J9 701 aaKnown RBP13.75□□□□□ -0.21
VIM-205ENST00000485947 SLC2A9Q9NRM0 540 aa13.75□□□□□ -0.21
VIM-205ENST00000485947 TBL2Q9Y4P3 447 aaKnown RBP13.75□□□□□ -0.21
VIM-205ENST00000485947 CRYM-AS1A6NIL9 109 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 CREBL2O60519 120 aaPredicted RBP13.74□□□□□ -0.21
VIM-205ENST00000485947 MMP23AO75900 390 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 OR8U9P0C7N5 309 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 AKR1C4P17516 323 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 CD34P28906 385 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 BCAP31P51572 246 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 PIGPP57054 158 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 LRRC75BQ2VPJ9 315 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 ZNF626Q68DY1 528 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 ZNF818PQ6ZRF7 136 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 LYG2Q86SG7 212 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 SGPP2Q8IWX5 399 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 ZNF439Q8NDP4 499 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 OR11H6Q8NGC7 330 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 OR8U1Q8NH10 309 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 LINC01006Q8NI28 216 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 ZNF431Q8TF32 576 aaPredicted RBP13.74□□□□□ -0.21
VIM-205ENST00000485947 CAPSLQ8WWF8 208 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 ABHD14AQ9BUJ0 271 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 OR2D2Q9H210 308 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 CCL28Q9NRJ3 127 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 ZNF221Q9UK13 617 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 GAB2Q9UQC2 676 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 RNF114Q9Y508 228 aa13.74□□□□□ -0.21
VIM-205ENST00000485947 HLA-AP01891 365 aaKnown RBP13.73□□□□□ -0.21
VIM-205ENST00000485947 PI3P19957 117 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 CBX3Q13185 183 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 PPP1R1AQ13522 171 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 FAM53AQ6NSI3 398 aaPredicted RBP13.73□□□□□ -0.21
VIM-205ENST00000485947 SLC25A48Q6ZT89 311 aaKnown RBP13.73□□□□□ -0.21
VIM-205ENST00000485947 CADM3Q8N126 398 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 LINC00311Q8N616 119 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.73□□□□□ -0.21
VIM-205ENST00000485947 ZNF596Q8TC21 504 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 CHAC2Q8WUX2 184 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 RTN4IP1Q8WWV3 396 aaPredicted RBP13.73□□□□□ -0.21
VIM-205ENST00000485947 MALSU1Q96EH3 234 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 AJUBAQ96IF1 538 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 SSX3Q99909 188 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 CITED1Q99966 193 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 SEC22CQ9BRL7 303 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 AGMATQ9BSE5 352 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 TMEM133Q9H2Q1 129 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 OR51J1Q9H342 316 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 PSG11Q9UQ72 335 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 KCNIP3Q9Y2W7 256 aa13.73□□□□□ -0.21
VIM-205ENST00000485947 TEX13DA0A0J9YY54 714 aaPredicted RBP13.72□□□□□ -0.21
VIM-205ENST00000485947 A0A1W2PRD5 423 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 A0A1W2PRF3 423 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 A0A1W2PRM7 423 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 C9orf170A2RU37 121 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 HSD17B6O14756 317 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 TIMM23O14925 209 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 B3GALNT1O75752 331 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 SFT2D2O95562 160 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 TRAPPC2P0DI81 140 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 TRAPPC2BP0DI82 140 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 ANXA3P12429 323 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 VAMP1P23763 118 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 DLX1P56177 255 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 DHRS2Q13268 280 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 PHLDA2Q53GA4 152 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 KCTD9Q7L273 389 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 PNKDQ8N490 385 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 GALNT14Q96FL9 552 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 RANBP3Q9H6Z4 567 aaPredicted RBP13.72□□□□□ -0.21
VIM-205ENST00000485947 NAA60Q9H7X0 242 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 PIPOXQ9P0Z9 390 aa13.72□□□□□ -0.21
VIM-205ENST00000485947 ST8SIA5O15466 376 aa13.71□□□□□ -0.21
VIM-205ENST00000485947 DUS4LO95620 317 aaKnown RBP13.71□□□□□ -0.21
VIM-205ENST00000485947 GPR12P47775 334 aa13.71□□□□□ -0.21
VIM-205ENST00000485947 DYNLT3P51808 116 aa13.71□□□□□ -0.21
VIM-205ENST00000485947 PROK1P58294 105 aa13.71□□□□□ -0.21
VIM-205ENST00000485947 CT45A1Q5HYN5 189 aa13.71□□□□□ -0.21
VIM-205ENST00000485947 MINOS1Q5TGZ0 78 aa13.71□□□□□ -0.21
VIM-205ENST00000485947 Q6ZSV7 163 aa13.71□□□□□ -0.21
VIM-205ENST00000485947 DRAM1Q8N682 238 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms