RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 DUX3Q96PT4 197 aa14.42□□□□□ -0.1
COL1A1-206ENST00000485870 RNF5Q99942 180 aa14.42□□□□□ -0.1
COL1A1-206ENST00000485870 METTL1Q9UBP6 276 aaKnown RBP14.42□□□□□ -0.1
COL1A1-206ENST00000485870 GAB2Q9UQC2 676 aa14.42□□□□□ -0.1
COL1A1-206ENST00000485870 TRAV41A0A0B4J266 112 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 TMEM127O75204 238 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 NFYAP23511 347 aaPredicted RBP14.41□□□□□ -0.1
COL1A1-206ENST00000485870 THBS3P49746 956 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 CX3CL1P78423 397 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 ECSCRQ19T08 205 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 MRPL41Q8IXM3 137 aaKnown RBP14.41□□□□□ -0.1
COL1A1-206ENST00000485870 LINC00482Q8N8I6 264 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 RNF152Q8N8N0 203 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 FLYWCH2Q96CP2 140 aaKnown RBP14.41□□□□□ -0.1
COL1A1-206ENST00000485870 TSNAXQ99598 290 aaKnown RBP14.41□□□□□ -0.1
COL1A1-206ENST00000485870 FUNDC2Q9BWH2 189 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 DIABLOQ9NR28 239 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 FBXO7Q9Y3I1 522 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 A3GALT2U3KPV4 340 aa14.41□□□□□ -0.1
COL1A1-206ENST00000485870 A0A0A6YYH2 397 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 A6NJ64 397 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 SLC25A17O43808 307 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 CTXN2P0C2S0 81 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 PSMB8P28062 276 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 PPIFP30405 207 aaKnown RBP14.4□□□□□ -0.1
COL1A1-206ENST00000485870 SLC6A1P30531 599 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 ZNF660Q6AZW8 331 aaPredicted RBP14.4□□□□□ -0.1
COL1A1-206ENST00000485870 CNIH2Q6PI25 160 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 GVQW1Q8N7I0 195 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 BVESQ8NE79 360 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 AUNIPQ9H7T9 357 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 TPSG1Q9NRR2 321 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 ANXA10Q9UJ72 324 aa14.4□□□□□ -0.1
COL1A1-206ENST00000485870 SPDEFO95238 335 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 CA2P00918 260 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 FCER2P06734 321 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 SMIM18P0DKX4 95 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 PTHLHP12272 177 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 MYCNOSP40205 109 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 VBP1P61758 197 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 NCS1P62166 190 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 CBX3Q13185 183 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 DEFB136Q30KP8 78 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 UBE2NLQ5JXB2 153 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 TMEM65Q6PI78 240 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 OR13F1Q8NGS4 319 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 RCC1LQ96I51 464 aaKnown RBP14.39□□□□□ -0.11
COL1A1-206ENST00000485870 RAX2Q96IS3 184 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 OR2W1Q9Y3N9 320 aa14.39□□□□□ -0.11
COL1A1-206ENST00000485870 TGP01266 2768 aa14.38□□□□□ -0.11
COL1A1-206ENST00000485870 CDX1P47902 265 aaPredicted RBP14.38□□□□□ -0.11
COL1A1-206ENST00000485870 LUMP51884 338 aaPredicted RBP14.38□□□□□ -0.11
COL1A1-206ENST00000485870 ARPC4P59998 168 aa14.38□□□□□ -0.11
COL1A1-206ENST00000485870 RTL8BQ17RB0 113 aa14.38□□□□□ -0.11
COL1A1-206ENST00000485870 ZNF645Q8N7E2 425 aa14.38□□□□□ -0.11
COL1A1-206ENST00000485870 SAMD12Q8N8I0 201 aa14.38□□□□□ -0.11
COL1A1-206ENST00000485870 BEST4Q8NFU0 473 aa14.38□□□□□ -0.11
COL1A1-206ENST00000485870 HARBI1Q96MB7 349 aa14.38□□□□□ -0.11
COL1A1-206ENST00000485870 FAM103A1Q9BTL3 118 aaKnown RBP14.38□□□□□ -0.11
COL1A1-206ENST00000485870 KLK15Q9H2R5 256 aa14.38□□□□□ -0.11
COL1A1-206ENST00000485870 DNAH3Q8TD57 4116 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 IGKV1D-13A0A0B4J2D9 117 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 A0A1W2PN81 502 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 LINC00473A8K010 186 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 CCL24O00175 119 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 IGLV1-40P01703 118 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 IGLV2-23P01705 113 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 HLA-DQB1P01920 261 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 IGKV1-13P0DP09 117 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 EGR2P11161 476 aaPredicted RBP14.37□□□□□ -0.11
COL1A1-206ENST00000485870 DUTP33316 252 aaKnown RBP14.37□□□□□ -0.11
COL1A1-206ENST00000485870 CHRNA7P36544 502 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 RAB25P57735 213 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 TAGLNQ01995 201 aaKnown RBP14.37□□□□□ -0.11
COL1A1-206ENST00000485870 FOXB2Q5VYV0 432 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 PPP1R27Q86WC6 154 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 HOGA1Q86XE5 327 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 MINDY2Q8NBR6 621 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 SLC25A46Q96AG3 418 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 S100A16Q96FQ6 103 aaKnown RBP14.37□□□□□ -0.11
COL1A1-206ENST00000485870 ADTRPQ96IZ2 230 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 P2RX4Q99571 388 aa14.37□□□□□ -0.11
COL1A1-206ENST00000485870 MEIS3P1A6NDR6 274 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 SHOXO15266 292 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 XRCC3O43542 346 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 LGALS7P47929 136 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 CRIP2P52943 208 aaPredicted RBP14.36□□□□□ -0.11
COL1A1-206ENST00000485870 GNB1P62873 340 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 TMEM177Q53S58 311 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 C19orf54Q5BKX5 351 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 ZNF562Q6V9R5 426 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 GRPEL2Q8TAA5 225 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 MYOZ3Q8TDC0 251 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 CASTOR1Q8WTX7 329 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 C4orf3Q8WVX3 66 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 DDB2Q92466 427 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 NECAP2Q9NVZ3 263 aa14.36□□□□□ -0.11
COL1A1-206ENST00000485870 FOXA2Q9Y261 457 aaPredicted RBP14.36□□□□□ -0.11
COL1A1-206ENST00000485870 SOX15O60248 233 aa14.35□□□□□ -0.11
COL1A1-206ENST00000485870 TUSC2O75896 110 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms