RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 SCRT1Q9BWW7 348 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 CSTL1Q9H114 145 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 HRH4Q9H3N8 390 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 RHOFQ9HBH0 211 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 MDFICQ9P1T7 246 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 ING4Q9UNL4 249 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 TMEM14AQ9Y6G1 99 aa3.84□□□□□ -1.79
PTPN4-210ENST00000485247 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 DEFB131BA0A096LNP1 70 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 SAA2-SAA4A0A096LPE2 208 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.83□□□□□ -1.8
PTPN4-210ENST00000485247 A0A0G2JND7 137 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 TMEM213A2RRL7 107 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 HMX3A6NHT5 357 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 H7C2Y5 167 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 TNFRSF11BO00300 401 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 SLC22A1O15245 554 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 SPINT2O43291 252 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 KRT36O76013 467 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 FADS2O95864 444 aaKnown RBP3.83□□□□□ -1.8
PTPN4-210ENST00000485247 FABP3P05413 133 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 SAA2P0DJI9 122 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-210ENST00000485247 SLC2A5P22732 501 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 ACTR3P61158 418 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 ADARB1P78563 741 aaKnown RBP3.83□□□□□ -1.8
PTPN4-210ENST00000485247 EXOSC2Q13868 293 aaKnown RBP3.83□□□□□ -1.8
PTPN4-210ENST00000485247 GNMTQ14749 295 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 PSG5Q15238 335 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 MAPRE2Q15555 327 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 PIGYQ3MUY2 71 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 ODF3L2Q3SX64 289 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 MORN2Q502X0 79 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 ZNF833PQ6ZTB9 187 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 APRG1Q8IVJ8 170 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 SAXO1Q8IYX7 474 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 LYPD1Q8N2G4 141 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 OR10AC1Q8NH08 325 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 CD300LFQ8TDQ1 290 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 FRZBQ92765 325 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 GHSRQ92847 366 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 SPSB1Q96BD6 273 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 C10orf35Q96D05 121 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 MRPS24Q96EL2 167 aaKnown RBP3.83□□□□□ -1.8
PTPN4-210ENST00000485247 PYURFQ96I23 114 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 ABHD14AQ9BUJ0 271 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 OR2S2Q9NQN1 319 aa3.83□□□□□ -1.8
PTPN4-210ENST00000485247 ZNF230Q9UIE0 474 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-210ENST00000485247 LOC107986453A0A1B0GWG9 222 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 FAM90A23PA8MXZ1 464 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 AIPO00170 330 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 GGCTO75223 188 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 OR7C1O76099 320 aaPredicted RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 HBZP02008 142 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 PRH1P02810 166 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 MT-ND4P03905 459 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 CD74P04233 296 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 CT45A6P0DMU7 189 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 CT45A5P0DMU8 189 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 CT45A7P0DMV0 189 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 T-ENOLP0DO92 83 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 DBTP11182 482 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 PPP1CCP36873 323 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 RHOGP84095 191 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 ATP5G2Q06055 141 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 PJVKQ0ZLH3 352 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 ALKBH1Q13686 389 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 IL13RA2Q14627 380 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 GINS1Q14691 196 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 SYT6Q5T7P8 510 aaPredicted RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 ELP2Q6IA86 826 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 UTS2BQ765I0 119 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 ZNF367Q7RTV3 350 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 Q8NAQ8 132 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 ADAD2Q8NCV1 583 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 CCDC54Q8NEL0 328 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 OR52L2PQ8NGH6 319 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 OR13C9Q8NGT0 318 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 OR10K1Q8NGX5 313 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 NEK7Q8TDX7 302 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 ANP32BQ92688 251 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 TRIM63Q969Q1 353 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 FAM46BQ96A09 425 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 CNN2Q99439 309 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 PHB2Q99623 299 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 NIPSNAP1Q9BPW8 284 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 RCC2Q9P258 522 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 TRAPPC2LQ9UL33 140 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 RPL36Q9Y3U8 105 aaKnown RBP3.82□□□□□ -1.8
PTPN4-210ENST00000485247 DNAH5Q8TE73 4624 aa3.82□□□□□ -1.8
PTPN4-210ENST00000485247 TRAV25A0A0B4J276 109 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 IGHV4-28A0A0C4DH34 117 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 CCDC182A6NF36 153 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 OR5H14A6NHG9 310 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 ZNF670-ZNF695F2Z2N8 137 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 H0YJW9 148 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 H3BNX3 289 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 GMNNO75496 209 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 CA1P00915 261 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-210ENST00000485247 IGHV3-23P01764 117 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 SMR3BP02814 79 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 244.2 ms