RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 CRPP02741 224 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 S100A9P06702 114 aaKnown RBP0.56□□□□□ -2.32
VPS50-217ENST00000485140 IVLP07476 585 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 PRB4P10163 310 aaPredicted RBP0.56□□□□□ -2.32
VPS50-217ENST00000485140 GPX2P18283 190 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 F8A1P23610 371 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 RPL27AP46776 148 aaKnown RBP0.56□□□□□ -2.32
VPS50-217ENST00000485140 PSMD7P51665 324 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 LINC00313P59037 77 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 SYCP1Q15431 976 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 LYZL1Q6UWQ5 148 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 KTN1-AS1Q86SY8 53 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 RPS4Y2Q8TD47 263 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 LRRC45Q96CN5 670 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 MS4A6EQ96DS6 147 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 TMA16Q96EY4 203 aaKnown RBP0.56□□□□□ -2.32
VPS50-217ENST00000485140 CPNE2Q96FN4 548 aaPredicted RBP0.56□□□□□ -2.32
VPS50-217ENST00000485140 Q96M85 177 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 FAM210AQ96ND0 272 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 VCX3BQ9H321 246 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 OR51B6Q9H340 312 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 TIMM9Q9Y5J7 89 aa0.56□□□□□ -2.32
VPS50-217ENST00000485140 NPATQ14207 1427 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 CUL9Q8IWT3 2517 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 GOLGA8RI6L899 631 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 MRASO14807 208 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 PGLYRP1O75594 196 aaPredicted RBP0.55□□□□□ -2.32
VPS50-217ENST00000485140 ASS1P00966 412 aaKnown RBP0.55□□□□□ -2.32
VPS50-217ENST00000485140 SERPINA7P05543 415 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 SLC35E2BP0CK96 405 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 PSMB8P28062 276 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 OR10J1P30954 320 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 GABRA2P47869 451 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 EVX1P49640 407 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 DAPP51397 102 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 RBM11P57052 281 aaKnown RBP0.55□□□□□ -2.32
VPS50-217ENST00000485140 FXYD7P58549 80 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 AP1S1P61966 158 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 HERVK_113P63121 156 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 HOXC5Q00444 222 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 DEFB115Q30KQ5 88 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 SLC36A2Q495M3 483 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 ZNF705AQ6ZN79 300 aaPredicted RBP0.55□□□□□ -2.32
VPS50-217ENST00000485140 ATP5L2Q7Z4Y8 100 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 BAP18Q8IXM2 172 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 OR52E4Q8NGH9 312 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 OR13C8Q8NGS7 320 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 DYNC2LI1Q8TCX1 351 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 MBD3L1Q8WWY6 194 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 SIKE1Q9BRV8 207 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 METTL9Q9H1A3 318 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 EMC3Q9P0I2 261 aa0.55□□□□□ -2.32
VPS50-217ENST00000485140 GOLGA8QA0A0J9YX86 632 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 LOC100506127A0A0U1RQW1 187 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 DAPL1A0PJW8 107 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 HMSDA8MTL9 139 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 CREBL2O60519 120 aaPredicted RBP0.54□□□□□ -2.32
VPS50-217ENST00000485140 NEMFO60524 1076 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 RPSAP08865 295 aaKnown RBP0.54□□□□□ -2.32
VPS50-217ENST00000485140 IFNGR2P38484 337 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 CCR2P41597 374 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 H2BFSP57053 126 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 TAS2R20P59543 309 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 USF2Q15853 346 aaPredicted RBP0.54□□□□□ -2.32
VPS50-217ENST00000485140 Q3ZCU0 254 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 XKRXQ6PP77 449 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 FP248Q71RG6 208 aaPredicted RBP0.54□□□□□ -2.32
VPS50-217ENST00000485140 LRRC34Q8IZ02 419 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 DAND5Q8N907 189 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 LFNGQ8NES3 379 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 OR51T1Q8NGJ9 327 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 OR5AK3PQ8NH89 298 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 STOML3Q8TAV4 291 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 Q8WTZ3 238 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 CYGBQ8WWM9 190 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 C12orf43Q96C57 262 aaKnown RBP0.54□□□□□ -2.32
VPS50-217ENST00000485140 GNB1LQ9BYB4 327 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 ASCL3Q9NQ33 180 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 CHMP5Q9NZZ3 219 aa0.54□□□□□ -2.32
VPS50-217ENST00000485140 CHD2O14647 1828 aaKnown RBP0.54□□□□□ -2.32
VPS50-217ENST00000485140 ZNF469Q96JG9 3925 aaPredicted RBP0.54□□□□□ -2.32
VPS50-217ENST00000485140 NUP153P49790 1475 aaKnown RBP0.54□□□□□ -2.32
VPS50-217ENST00000485140 FREM1Q5H8C1 2179 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 MPZL2O60487 215 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 LINC00614P0C842 121 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 CDK9P50750 372 aaKnown RBP0.53□□□□□ -2.32
VPS50-217ENST00000485140 TMEM33P57088 247 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 SNAP25P60880 206 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 TBPL1P62380 186 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 HIST1H4AP62805 103 aaKnown RBP0.53□□□□□ -2.32
VPS50-217ENST00000485140 PRB3Q04118 309 aaPredicted RBP0.53□□□□□ -2.32
VPS50-217ENST00000485140 AKR1C1Q04828 323 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 CDK5R1Q15078 307 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 ELOBQ15370 118 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 MIAQ16674 131 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 MESTQ5EB52 335 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 LCN8Q6JVE9 175 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 SLC36A1Q7Z2H8 476 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 DCXRQ7Z4W1 244 aa0.53□□□□□ -2.32
VPS50-217ENST00000485140 TMEM86AQ8N2M4 240 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms