RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PRR18Q8N4B5 295 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 C15orf40Q8WUR7 153 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 FAM46BQ96A09 425 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 FLYWCH2Q96CP2 140 aaKnown RBP10.02□□□□□ -0.81
HDAC6-227ENST00000485102 MRPL20Q9BYC9 149 aaKnown RBP10.02□□□□□ -0.81
HDAC6-227ENST00000485102 DCSTAMPQ9H295 470 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 KIAA1456Q9P272 454 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 RSL24D1Q9UHA3 163 aaKnown RBP10.02□□□□□ -0.81
HDAC6-227ENST00000485102 DAPK2Q9UIK4 370 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 ADAM30Q9UKF2 790 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 SPATA2Q9UM82 520 aa10.02□□□□□ -0.81
HDAC6-227ENST00000485102 IGHV4OR15-8A0A075B7B6 117 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 A0A087WW49 117 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 HSPA12AO43301 675 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 IGLV1-51P01701 117 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 ZNF182P17025 639 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-227ENST00000485102 VBP1P61758 197 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 LSM3P62310 102 aaKnown RBP10.01□□□□□ -0.81
HDAC6-227ENST00000485102 CX3CL1P78423 397 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 MXD1Q05195 221 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 IDNKQ5T6J7 187 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 OR52L2PQ8NGH6 319 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 ISOC1Q96CN7 298 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 DGCR14Q96DF8 476 aaKnown RBP10.01□□□□□ -0.81
HDAC6-227ENST00000485102 RHOVQ96L33 236 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 Q96M66 194 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 OR4C12Q96R67 309 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 RNF5Q99942 180 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 ALX4Q9H161 411 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-227ENST00000485102 DIABLOQ9NR28 239 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 RNF150Q9ULK6 438 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 HSF4Q9ULV5 492 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 FBXO7Q9Y3I1 522 aa10.01□□□□□ -0.81
HDAC6-227ENST00000485102 A0A1W2PN81 502 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 RRHO14718 337 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 PDCD6O75340 191 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 TPPPO94811 219 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 IGHV4-30-4P0DP06 118 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 MC5RP33032 325 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 CHRNA7P36544 502 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 PPP1CCP36873 323 aaKnown RBP10□□□□□ -0.81
HDAC6-227ENST00000485102 RPS19P39019 145 aaKnown RBP10□□□□□ -0.81
HDAC6-227ENST00000485102 PITPNAQ00169 270 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 GNMTQ14749 295 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 HES5Q5TA89 166 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 FAM89BQ8N5H3 189 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 MRPL30Q8TCC3 161 aaKnown RBP10□□□□□ -0.81
HDAC6-227ENST00000485102 GALMQ96C23 342 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 S100A16Q96FQ6 103 aaKnown RBP10□□□□□ -0.81
HDAC6-227ENST00000485102 IFI27L2Q9H2X8 130 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 SLA2Q9H6Q3 261 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 PLEKHJ1Q9NW61 149 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 GAR1Q9NY12 217 aaKnown RBP10□□□□□ -0.81
HDAC6-227ENST00000485102 CCDC59Q9P031 241 aaKnown RBP10□□□□□ -0.81
HDAC6-227ENST00000485102 PIPOXQ9P0Z9 390 aa10□□□□□ -0.81
HDAC6-227ENST00000485102 SAA2-SAA4A0A096LPE2 208 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 OR5H14A6NHG9 310 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 ITGB1BP1O14713 200 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 RBBP9O75884 186 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 SAA2P0DJI9 122 aaPredicted RBP9.99□□□□□ -0.81
HDAC6-227ENST00000485102 TALDO1P37837 337 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 OR3A3P47888 321 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 OR10A3P58181 314 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 NCS1P62166 190 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 QRFPP83859 136 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 ECSCRQ19T08 205 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 ZNF562Q6V9R5 426 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 OR2AK2Q8NG84 335 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 ELOVL1Q9BW60 279 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 A3GALT2U3KPV4 340 aa9.99□□□□□ -0.81
HDAC6-227ENST00000485102 SHISA3A0PJX4 238 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 UBE2QL1A1L167 161 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 FCN1O00602 326 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 RAB29O14966 203 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 CT45A6P0DMU7 189 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 CT45A5P0DMU8 189 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 CT45A7P0DMV0 189 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 HMGN3Q15651 99 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 ACTBL2Q562R1 376 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 UBE2NLQ5JXB2 153 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 ZFAND6Q6FIF0 208 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 MOB1BQ7L9L4 216 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 PPP1R27Q86WC6 154 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 OR5AN1Q8NGI8 311 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 RAB3CQ96E17 227 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 GFI1Q99684 422 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 FBXL15Q9H469 300 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 BANF2Q9H503 90 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 CEPT1Q9Y6K0 416 aa9.98□□□□□ -0.81
HDAC6-227ENST00000485102 HYDINQ4G0P3 5121 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 TMEM272A0A1B0GTI8 110 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 H0YJW9 148 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 H3BMQ9 156 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 BRI3O95415 125 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 APOA1P02647 267 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 GSTP1P09211 210 aaKnown RBP9.97□□□□□ -0.81
HDAC6-227ENST00000485102 ZP3P21754 424 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 CD40LGP29965 261 aa9.97□□□□□ -0.81
HDAC6-227ENST00000485102 UNC119Q13432 240 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms