RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 TRGC1P0CF51 173 aa12.46□□□□□ -0.42
ATG4B-220ENST00000482507 FOSL1P15407 271 aa12.46□□□□□ -0.42
ATG4B-220ENST00000482507 MDKP21741 143 aaPredicted RBP12.46□□□□□ -0.42
ATG4B-220ENST00000482507 ACSF3Q4G176 576 aaPredicted RBP12.46□□□□□ -0.42
ATG4B-220ENST00000482507 MRGPRGQ86SM5 289 aa12.46□□□□□ -0.42
ATG4B-220ENST00000482507 C11orf53Q8IXP5 236 aa12.46□□□□□ -0.42
ATG4B-220ENST00000482507 GCNT2Q8N0V5 402 aa12.46□□□□□ -0.42
ATG4B-220ENST00000482507 PARD6GQ9BYG4 376 aaPredicted RBP12.46□□□□□ -0.42
ATG4B-220ENST00000482507 GPR61Q9BZJ8 451 aa12.46□□□□□ -0.42
ATG4B-220ENST00000482507 HSPB7Q9UBY9 170 aa12.46□□□□□ -0.42
ATG4B-220ENST00000482507 TRGV5A0A0B4J1U4 118 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 S1PR2O95136 353 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 AESQ08117 197 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 UNQ6494/PRO21346Q6UXR6 183 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 ZNF645Q8N7E2 425 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 HES4Q9HCC6 221 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 GAR1Q9NY12 217 aaKnown RBP12.45□□□□□ -0.42
ATG4B-220ENST00000482507 SVILO95425 2214 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 ATRXP46100 2492 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 TLN1Q9Y490 2541 aaKnown RBP12.45□□□□□ -0.42
ATG4B-220ENST00000482507 TRAV17A0A0B4J275 112 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 ODAMA1E959 279 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 C17orf98A8MV24 154 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 CLDN34H7C241 214 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 MLNRO43193 412 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 ZNF737O75373 536 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 PNRC1Q12796 327 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-220ENST00000482507 C4orf17Q53FE4 359 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 HIST3H2BBQ8N257 126 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 RBMXL3Q8N7X1 1067 aaKnown RBP12.45□□□□□ -0.42
ATG4B-220ENST00000482507 GATAD1Q8WUU5 269 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 COQ2Q96H96 371 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 P2RX4Q99571 388 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 CDH20Q9HBT6 801 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 TMEM242Q9NWH2 141 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 TP53TG5Q9Y2B4 290 aa12.45□□□□□ -0.42
ATG4B-220ENST00000482507 ACACBO00763 2458 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 PMS2P5A8MQ11 134 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 IQCF6A8MYZ5 107 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 FAM90A26D6RGX4 464 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 TMPRSS3P57727 454 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 BTNL3Q6UXE8 466 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 C1orf87Q8N0U7 546 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 LHX4Q969G2 390 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 ZDHHC16Q969W1 377 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 TAAR6Q96RI8 345 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 SLC25A22Q9H936 323 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 USF3Q68DE3 2245 aa12.44□□□□□ -0.42
ATG4B-220ENST00000482507 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 HBZP02008 142 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 RAC2P15153 192 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 OR10D4PQ8NGN7 298 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 PINX1Q96BK5 328 aaKnown RBP12.43□□□□□ -0.42
ATG4B-220ENST00000482507 METRNQ9UJH8 293 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 PRR14LQ5THK1 2151 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 TMEM30CPA0ZSE6 113 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 LRRC30A6NM36 301 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 ZG16O60844 167 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 DEFA4P12838 97 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 SPINK9Q5DT21 86 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 CENPVQ7Z7K6 275 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-220ENST00000482507 TPRX1Q8N7U7 411 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 OR13D1Q8NGV5 346 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 KLF14Q8TD94 323 aaPredicted RBP12.43□□□□□ -0.42
ATG4B-220ENST00000482507 ZCCHC14Q8WYQ9 949 aaKnown RBP12.43□□□□□ -0.42
ATG4B-220ENST00000482507 GALMQ96C23 342 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 SLC39A9Q9NUM3 307 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 SPTA1P02549 2419 aa12.43□□□□□ -0.42
ATG4B-220ENST00000482507 RNF212BA8MTL3 300 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 J3QW42 95 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 S100A2P29034 98 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 TFF3Q07654 80 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 MRGPRDQ8TDS7 321 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 ZDHHC11Q9H8X9 412 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 RELNP78509 3460 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 ITPR1Q14643 2758 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 SEC14L6B5MCN3 397 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 AGFG2O95081 481 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 IL2RGP31785 369 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 UBE2NP61088 152 aaKnown RBP12.42□□□□□ -0.42
ATG4B-220ENST00000482507 MEF2BQ02080 365 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-220ENST00000482507 PRAMEF6Q5VXH4 476 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 IGFL3Q6UXB1 125 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 GMPPAQ96IJ6 420 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-220ENST00000482507 OBP2BQ9NPH6 170 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 KCNIP1Q9NZI2 227 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 DMRT1Q9Y5R6 373 aa12.42□□□□□ -0.42
ATG4B-220ENST00000482507 TRBV24-1A0A075B6N3 115 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 IGHV3-43A0A0B4J1X8 118 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 LINC00473A8K010 186 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 IGHV3-43DP0DP04 118 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 SSTR5P35346 364 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 NKX6-1P78426 367 aaPredicted RBP12.41□□□□□ -0.42
ATG4B-220ENST00000482507 PMS2P11Q13670 270 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 GABRA6Q16445 453 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 C9orf152Q5JTZ5 239 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 ZNF383Q8NA42 475 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 SMIM7Q9BQ49 75 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 FZR1Q9UM11 496 aa12.41□□□□□ -0.42
ATG4B-220ENST00000482507 TIMM9Q9Y5J7 89 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms