RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 RNASE11Q8TAA1 199 aaKnown RBP12.05□□□□□ -0.48
CHD3-211ENST00000481999 C5orf30Q96GV9 206 aa12.05□□□□□ -0.48
CHD3-211ENST00000481999 RAI1Q7Z5J4 1906 aaPredicted RBP12.04□□□□□ -0.48
CHD3-211ENST00000481999 A0A1B0GWJ7 208 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 SRRM5B3KS81 715 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 HBZP02008 142 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 RAB2AP61019 212 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
CHD3-211ENST00000481999 TLE4Q04727 773 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 LY6DQ14210 128 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 FIP1L1Q6UN15 594 aaKnown RBP12.04□□□□□ -0.48
CHD3-211ENST00000481999 WIPI2Q9Y4P8 454 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 HBE1P02100 147 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 TAS2R30P59541 319 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 ZNF808Q8N4W9 903 aaPredicted RBP12.04□□□□□ -0.48
CHD3-211ENST00000481999 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
CHD3-211ENST00000481999 PRORYQ9H606 182 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 GCM1Q9NP62 436 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 PUS1Q9Y606 427 aaKnown RBP eCLIP12.04□□□□□ -0.48
CHD3-211ENST00000481999 WSB1Q9Y6I7 421 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 DOCK11Q5JSL3 2073 aa12.04□□□□□ -0.48
CHD3-211ENST00000481999 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
CHD3-211ENST00000481999 AKAP6Q13023 2319 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 TMEM30CPA0ZSE6 113 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 C5orf52A6NGY3 159 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 KIAA1324LA8MWY0 1029 aaPredicted RBP12.03□□□□□ -0.48
CHD3-211ENST00000481999 TXNL1O43396 289 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 ZNF737O75373 536 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 IFNA5P01569 189 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 CD200P41217 278 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 RUNX1Q01196 453 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 SP5Q6BEB4 398 aaPredicted RBP12.03□□□□□ -0.48
CHD3-211ENST00000481999 BTNL3Q6UXE8 466 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 TMEM108Q6UXF1 575 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 RND1Q92730 232 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 JKAMPQ9P055 326 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 A0A1W2PPE2 198 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 FAM90A27PA6NNH2 459 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 FAM24BQ8N5W8 94 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 MALSU1Q96EH3 234 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 ARFGEF3Q5TH69 2177 aa12.03□□□□□ -0.48
CHD3-211ENST00000481999 IGKV1-39P01597 117 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 IGKV1D-39P04432 117 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 ARG1P05089 322 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 ACAA1P09110 424 aaPredicted RBP12.02□□□□□ -0.48
CHD3-211ENST00000481999 OR4A8P0C604 315 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 TUBG1P23258 451 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 EDDM3BP56851 147 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 ADIPOQQ15848 244 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 SLC25A24Q6NUK1 477 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 DRAM1Q8N682 238 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 OR2D2Q9H210 308 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 TUBG2Q9NRH3 451 aa12.02□□□□□ -0.48
CHD3-211ENST00000481999 CACNA1BQ00975 2339 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 hCG_1809904A0A1W2PP81 198 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 A0A1W2PR64 198 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 A0A1W2PRV1 198 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 UBE2CO00762 179 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 RAMP3O60896 148 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 EIF3GO75821 320 aaKnown RBP eCLIP12.02□□□□□ -0.49
CHD3-211ENST00000481999 HSPB1P04792 205 aaKnown RBP12.02□□□□□ -0.49
CHD3-211ENST00000481999 SRP19P09132 144 aaKnown RBP12.02□□□□□ -0.49
CHD3-211ENST00000481999 IL2RGP31785 369 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 TNFAIP6P98066 277 aaPredicted RBP12.02□□□□□ -0.49
CHD3-211ENST00000481999 HAGHQ16775 308 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 ZNF506Q5JVG8 444 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 Q6ZRM9 215 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 LINC01560Q8TB33 94 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 GALMQ96C23 342 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 LIN7CQ9NUP9 197 aaKnown RBP12.02□□□□□ -0.49
CHD3-211ENST00000481999 CACNG5Q9UF02 275 aa12.02□□□□□ -0.49
CHD3-211ENST00000481999 H3BP45 60 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 SCAF4O95104 1147 aaKnown RBP12.01□□□□□ -0.49
CHD3-211ENST00000481999 OR2C1O95371 312 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 S100A8P05109 93 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 MAS1LP35410 378 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 ERVFRD-1P60508 538 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
CHD3-211ENST00000481999 FAM90A1Q86YD7 464 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 ZNF295-AS1Q8N0V1 137 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 LEAP2Q969E1 77 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 TRAV1-1A0A0B4J248 108 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 H3BQ15 152 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 ST8SIA5O15466 376 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 SYNGR2O43760 224 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 S100A12P80511 92 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 ICAM4Q14773 271 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 THNSL2Q86YJ6 484 aa12.01□□□□□ -0.49
CHD3-211ENST00000481999 PLAUP00749 431 aa12□□□□□ -0.49
CHD3-211ENST00000481999 RPL30P62888 115 aaKnown RBP12□□□□□ -0.49
CHD3-211ENST00000481999 TMEM267Q0VDI3 215 aaPredicted RBP12□□□□□ -0.49
CHD3-211ENST00000481999 SLC35E4Q6ICL7 350 aa12□□□□□ -0.49
CHD3-211ENST00000481999 CLDND2Q8NHS1 167 aa12□□□□□ -0.49
CHD3-211ENST00000481999 KCNIP1Q9NZI2 227 aa12□□□□□ -0.49
CHD3-211ENST00000481999 CSMD2Q7Z408 3487 aa12□□□□□ -0.49
CHD3-211ENST00000481999 DSCAML1Q8TD84 2053 aa12□□□□□ -0.49
CHD3-211ENST00000481999 LHBP01229 141 aa12□□□□□ -0.49
CHD3-211ENST00000481999 GYPAP02724 150 aa12□□□□□ -0.49
CHD3-211ENST00000481999 ZNF585BQ52M93 769 aa12□□□□□ -0.49
CHD3-211ENST00000481999 FAM216BQ8N7L0 139 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms