RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 ZNF486Q96H40 463 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-213ENST00000481019 ZNF2Q9BSG1 426 aaPredicted RBP9.79□□□□□ -0.84
PTPRF-213ENST00000481019 GHITMQ9H3K2 345 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 C16orf95Q9H693 158 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 ZNF702PQ9H963 129 aa9.79□□□□□ -0.84
PTPRF-213ENST00000481019 C14orf166Q9Y224 244 aaKnown RBP9.79□□□□□ -0.84
PTPRF-213ENST00000481019 TRAV6A0A075B6T7 132 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 TRBV6-7A0A0A0MS04 114 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 SH2D7A6NKC9 451 aaPredicted RBP9.78□□□□□ -0.84
PTPRF-213ENST00000481019 BET1O15155 118 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 SCTP09683 121 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 BLCAPP62952 87 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 MORN2Q502X0 79 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 SLC25A48Q6ZT89 311 aaKnown RBP9.78□□□□□ -0.84
PTPRF-213ENST00000481019 LHFPL1Q86WI0 220 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 CMTM1Q8IZ96 169 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 LINC00311Q8N616 119 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 DRAM1Q8N682 238 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 OR10X1Q8NGY0 326 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 TOMM40LQ969M1 308 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 ST6GALNAC6Q969X2 333 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 BEX1Q9HBH7 125 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 GNG12Q9UBI6 72 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 RNF114Q9Y508 228 aa9.78□□□□□ -0.84
PTPRF-213ENST00000481019 IGKV1D-8A0A087WSZ0 117 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 IGHV3-72A0A0B4J1Y9 119 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 IGKV1-6A0A0C4DH72 117 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 FAM90A9PA6NNJ1 464 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 SNRPGP15A8MWD9 76 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 PPYP01298 95 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 AMY1AP04745 511 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 PGAM2P15259 253 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 CEACAM3P40198 252 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 RAB25P57735 213 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 Q3ZCU0 254 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 ABCA11PQ4W5N1 156 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 FAAP20Q6NZ36 180 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 ODF3L1Q8IXM7 274 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 SLC38A6Q8IZM9 456 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 C8orf31Q8N9H6 132 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 CCDC71LQ8N9Z2 235 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 IL1F10Q8WWZ1 152 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 RPEQ96AT9 228 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 MOB3AQ96BX8 217 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 TOLLIPQ9H0E2 274 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 OR2S2Q9NQN1 319 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 OR1A1Q9P1Q5 309 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 JPT1Q9UK76 154 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 GPR132Q9UNW8 380 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 KCNIP3Q9Y2W7 256 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 OR2W1Q9Y3N9 320 aa9.77□□□□□ -0.85
PTPRF-213ENST00000481019 AMMECR1Q9Y4X0 333 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-213ENST00000481019 RBM7Q9Y580 266 aaKnown RBP9.77□□□□□ -0.85
PTPRF-213ENST00000481019 HAX1O00165 279 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 HSD17B6O14756 317 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 ARPC1BO15143 372 aaKnown RBP9.76□□□□□ -0.85
PTPRF-213ENST00000481019 CREBL2O60519 120 aaPredicted RBP9.76□□□□□ -0.85
PTPRF-213ENST00000481019 B3GALNT1O75752 331 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 TUSC2O75896 110 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 CTSDP07339 412 aaPredicted RBP9.76□□□□□ -0.85
PTPRF-213ENST00000481019 SNRNP70P08621 437 aaKnown RBP9.76□□□□□ -0.85
PTPRF-213ENST00000481019 ANXA3P12429 323 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 SPNP16150 400 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 CEACAM6P40199 344 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 LUMP51884 338 aaPredicted RBP9.76□□□□□ -0.85
PTPRF-213ENST00000481019 ZNF816Q0VGE8 651 aaPredicted RBP9.76□□□□□ -0.85
PTPRF-213ENST00000481019 HERPUD1Q15011 391 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 MSMO1Q15800 293 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 TATDN3Q17R31 274 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 TMEM95Q3KNT9 176 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 TMEM128Q5BJH2 165 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 IGSF11Q5DX21 431 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 LY6G6FQ5SQ64 297 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 ZNF660Q6AZW8 331 aaPredicted RBP9.76□□□□□ -0.85
PTPRF-213ENST00000481019 SLC25A42Q86VD7 318 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 ZBTB34Q8NCN2 500 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 OR13C8Q8NGS7 320 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 CAPSLQ8WWF8 208 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 AKR1E2Q96JD6 320 aa9.76□□□□□ -0.85
PTPRF-213ENST00000481019 IGHV1-3A0A0C4DH29 117 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 OOSP1A8MZH6 123 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 ITGB1BP1O14713 200 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 YPEL1O60688 119 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 TRAPPC2P0DI81 140 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 TRAPPC2BP0DI82 140 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 RAB7AP51149 207 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 HNF4GQ14541 408 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 C4orf46Q504U0 113 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 AADACL3Q5VUY0 350 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 LIAT1Q6ZQX7 453 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 SGPP2Q8IWX5 399 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 H1FOOQ8IZA3 346 aaPredicted RBP9.75□□□□□ -0.85
PTPRF-213ENST00000481019 Q8N2B8 174 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 MARCH1Q8TCQ1 289 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 RTN4IP1Q8WWV3 396 aaPredicted RBP9.75□□□□□ -0.85
PTPRF-213ENST00000481019 YPEL2Q96QA6 119 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 CITED1Q99966 193 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 IFI27L2Q9H2X8 130 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 SERTAD4Q9NUC0 356 aa9.75□□□□□ -0.85
PTPRF-213ENST00000481019 MGAM2Q2M2H8 2515 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms