RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 SCGB1D1O95968 90 aa11.21□□□□□ -0.61
PDZRN3-208ENST00000479530 S100GP29377 79 aa11.21□□□□□ -0.61
PDZRN3-208ENST00000479530 MPLP40238 635 aa11.21□□□□□ -0.61
PDZRN3-208ENST00000479530 POLR3KQ9Y2Y1 108 aaPredicted RBP11.21□□□□□ -0.61
PDZRN3-208ENST00000479530 MRPS18CQ9Y3D5 142 aaKnown RBP11.21□□□□□ -0.61
PDZRN3-208ENST00000479530 DMXL1Q9Y485 3027 aa11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 PGPEP1LA6NFU8 196 aa11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 GGCTO75223 188 aaKnown RBP11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 WISP2O76076 250 aa11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 TFF3Q07654 80 aa11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 FAM53AQ6NSI3 398 aaPredicted RBP11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 GBGT1Q8N5D6 347 aa11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 DEFB123Q8N688 67 aa11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 RBM7Q9Y580 266 aaKnown RBP11.21□□□□□ -0.62
PDZRN3-208ENST00000479530 TMEM250H0YL14 139 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 IL3RAP26951 378 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 RPP30P78346 268 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 DCAF10Q5QP82 559 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 FAM78BQ5VT40 261 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 BTNL3Q6UXE8 466 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 FGFRL1Q8N441 504 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 OR10G9Q8NGN4 311 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 OR10G7Q8NGN6 311 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 POM121L2Q96KW2 1035 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 TMEM9BQ9NQ34 198 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 DLL3Q9NYJ7 618 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 RAMP3O60896 148 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 CRYAAP02489 173 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 CNN1P51911 297 aaKnown RBP11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 IQCJQ1A5X6 159 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 TMEM14EPQ6UXP3 125 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 DTD1Q8TEA8 209 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 DERL1Q9BUN8 251 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 DEFB127Q9H1M4 99 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 FKBP11Q9NYL4 201 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
PDZRN3-208ENST00000479530 SELEP16581 610 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 GCH1P30793 250 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 PLGLB1Q02325 96 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 RNFT1Q5M7Z0 435 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 SAXO1Q8IYX7 474 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 OR1L1Q8NH94 360 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 TDRG1Q3Y452 100 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 TCF23Q7RTU1 214 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 TMPRSS7Q7RTY8 843 aa11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 RIMS4Q9H426 269 aaPredicted RBP11.19□□□□□ -0.62
PDZRN3-208ENST00000479530 CTXND1A0A1B0GTU2 59 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 SYNGR4O95473 234 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 CA6P23280 308 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 TDGF1P3P51864 188 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 ERVFC1-1P60608 527 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 COTL1Q14019 142 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 SPINK9Q5DT21 86 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 FFAR4Q5NUL3 377 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 DHRS13Q6UX07 377 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 ZNF114Q8NC26 417 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 APH1AQ96BI3 265 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 LINC00470Q9BZP3 86 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 OPN3Q9H1Y3 402 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 SMG1Q96Q15 3661 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 A6NNC1 897 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 KRASP01116 189 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 TYMSP04818 313 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 CELA3BP08861 270 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 C1QTNF9P0C862 333 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 ZNF25P17030 456 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 RPL15P61313 204 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 ACOT6Q3I5F7 207 aaPredicted RBP11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 GCSAMLQ5JQS6 135 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 CISD2Q8N5K1 135 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 DRAM1Q8N682 238 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 ZDHHC16Q969W1 377 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 ANAPC16Q96DE5 110 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 STRADBQ9C0K7 418 aa11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 TNRC6AQ8NDV7 1962 aaKnown RBP11.18□□□□□ -0.62
PDZRN3-208ENST00000479530 G6PCP35575 357 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 GNG10P50151 68 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 UBE2G2P60604 165 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 CST9LP1Q5W188 147 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 FAM58AQ8N1B3 248 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 APOBEC3DQ96AK3 386 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 PARD6GQ9BYG4 376 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 TRBV6-6A0A0A6YYG2 114 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 A0A0U1RQK1 487 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 ZNF320A2RRD8 509 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 GRIFINA4D1Z8 144 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 M0R143 59 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 SIRPB1O00241 398 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 SS18L1O75177 396 aaPredicted RBP11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 CD59P13987 128 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 MEOX1P50221 254 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 ALKBH6Q3KRA9 238 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 C1orf194Q5T5A4 169 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 LINC01551Q86U37 167 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 SDSLQ96GA7 329 aa11.17□□□□□ -0.62
PDZRN3-208ENST00000479530 PMS2P5A8MQ11 134 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 C11orf94C9JXX5 98 aa11.16□□□□□ -0.62
PDZRN3-208ENST00000479530 COL8A2P25067 703 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms