RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 Q8WTZ3 238 aa1.72□□□□□ -2.13
CCDC58-204ENST00000479414 DNAJB3Q8WWF6 145 aa1.72□□□□□ -2.13
CCDC58-204ENST00000479414 NKX6-2Q9C056 277 aaPredicted RBP1.72□□□□□ -2.13
CCDC58-204ENST00000479414 CHMP4BQ9H444 224 aaKnown RBP1.72□□□□□ -2.13
CCDC58-204ENST00000479414 RTEL1-TNFRSF6BF6WH68 1400 aa1.72□□□□□ -2.13
CCDC58-204ENST00000479414 RIMS2Q9UQ26 1411 aa1.72□□□□□ -2.13
CCDC58-204ENST00000479414 WDR90Q96KV7 1748 aa1.71□□□□□ -2.13
CCDC58-204ENST00000479414 FCGBPQ9Y6R7 5405 aaPredicted RBP1.71□□□□□ -2.14
CCDC58-204ENST00000479414 IGLV3-9A0A075B6K5 115 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 GRIFINA4D1Z8 144 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 ARRDC5A6NEK1 342 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 GOLGA6L10A6NI86 522 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 CALUO43852 315 aaPredicted RBP1.71□□□□□ -2.14
CCDC58-204ENST00000479414 PSMG1O95456 288 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 CRATP43155 626 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 XCL1P47992 114 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 HINT1P49773 126 aaPredicted RBP1.71□□□□□ -2.14
CCDC58-204ENST00000479414 SKP1P63208 163 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 GNA13Q14344 377 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 LGALS9BQ3B8N2 356 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 SAPCD1Q5SSQ6 148 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 BAP18Q8IXM2 172 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 LRRC34Q8IZ02 419 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 CYGBQ8WWM9 190 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 FAM215AQ9Y5M1 114 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 MED13Q9UHV7 2174 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 THSD7AQ9UPZ6 1657 aa1.71□□□□□ -2.14
CCDC58-204ENST00000479414 RAD50Q92878 1312 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 TMED7-TICAM2A0A0A6YYA0 188 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 TRAV8-1A0A0A6YYK1 113 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 TMEM235A6NFC5 223 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 RGS12O14924 1447 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 COCHO43405 550 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 RPL14P50914 215 aaKnown RBP1.7□□□□□ -2.14
CCDC58-204ENST00000479414 DNM1P34Q6PK57 102 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 SPATA24Q86W54 205 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 CD302Q8IX05 232 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 NAV1Q8NEY1 1877 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 OR2D3Q8NGH3 330 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 CLDND2Q8NHS1 167 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 SFRP2Q96HF1 295 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 SLC35G5Q96KT7 338 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 C7orf50Q9BRJ6 194 aaKnown RBP1.7□□□□□ -2.14
CCDC58-204ENST00000479414 SLC22A4Q9H015 551 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 NDUFB11Q9NX14 153 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 GMEB1Q9Y692 573 aa1.7□□□□□ -2.14
CCDC58-204ENST00000479414 CCDC88CQ9P219 2028 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 A0A1W2PQD3 144 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 RFPL4AA6NLU0 287 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 RFPL4AL1F8VTS6 287 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 J3QQQ9 107 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 UBE2L6O14933 153 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 TMEM33P57088 247 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 RPL26P61254 145 aaKnown RBP1.69□□□□□ -2.14
CCDC58-204ENST00000479414 JOSD1Q15040 202 aaPredicted RBP1.69□□□□□ -2.14
CCDC58-204ENST00000479414 SDHAF4Q5VUM1 108 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 MIEN1Q9BRT3 115 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 IMP3Q9NV31 184 aaKnown RBP1.69□□□□□ -2.14
CCDC58-204ENST00000479414 EMC3Q9P0I2 261 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 CFAP45Q9UL16 551 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 RPL26L1Q9UNX3 145 aaKnown RBP1.69□□□□□ -2.14
CCDC58-204ENST00000479414 PCYT1BQ9Y5K3 369 aaPredicted RBP1.69□□□□□ -2.14
CCDC58-204ENST00000479414 TENM1Q9UKZ4 2725 aa1.69□□□□□ -2.14
CCDC58-204ENST00000479414 UGT2B7P16662 529 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 TAS2R30P59541 319 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 SNAP25P60880 206 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 FABP5Q01469 135 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 FAM19A5Q7Z5A7 132 aaPredicted RBP1.68□□□□□ -2.14
CCDC58-204ENST00000479414 MRPS24Q96EL2 167 aaKnown RBP1.68□□□□□ -2.14
CCDC58-204ENST00000479414 TMEM109Q9BVC6 243 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 TIPINQ9BVW5 301 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 TTTY13Q9BZ97 58 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 POLR3HQ9Y535 204 aaPredicted RBP1.68□□□□□ -2.14
CCDC58-204ENST00000479414 PTPRBP23467 1997 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 A0A1W2PP64 1363 aa1.68□□□□□ -2.14
CCDC58-204ENST00000479414 DENND4BO75064 1496 aaPredicted RBP1.68□□□□□ -2.14
CCDC58-204ENST00000479414 KMT2BQ9UMN6 2715 aaPredicted RBP1.68□□□□□ -2.14
CCDC58-204ENST00000479414 COL4A1P02462 1669 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 TMSB15BA0A087X1C1 80 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 BIRC5O15392 142 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 BPGMP07738 259 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 IFNGR2P38484 337 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 ZNF90Q03938 601 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 ZNF791Q3KP31 576 aaPredicted RBP1.67□□□□□ -2.14
CCDC58-204ENST00000479414 SMCR5Q8TEV8 140 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 ASB13Q8WXK3 278 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 CPNE2Q96FN4 548 aaPredicted RBP1.67□□□□□ -2.14
CCDC58-204ENST00000479414 NMNAT3Q96T66 252 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 DERL2Q9GZP9 239 aa1.67□□□□□ -2.14
CCDC58-204ENST00000479414 ZFHX2Q9C0A1 2572 aaPredicted RBP1.67□□□□□ -2.14
CCDC58-204ENST00000479414 ZNF705FA8MVS1 300 aaPredicted RBP1.66□□□□□ -2.14
CCDC58-204ENST00000479414 F5H768 121 aa1.66□□□□□ -2.14
CCDC58-204ENST00000479414 STX10O60499 249 aa1.66□□□□□ -2.14
CCDC58-204ENST00000479414 HPGDSO60760 199 aa1.66□□□□□ -2.14
CCDC58-204ENST00000479414 RBM11P57052 281 aaKnown RBP1.66□□□□□ -2.14
CCDC58-204ENST00000479414 Q6ZTI0 123 aa1.66□□□□□ -2.14
CCDC58-204ENST00000479414 DCUN1D5Q9BTE7 237 aa1.66□□□□□ -2.14
CCDC58-204ENST00000479414 CUL9Q8IWT3 2517 aa1.66□□□□□ -2.14
CCDC58-204ENST00000479414 RP1L1Q8IWN7 2480 aaPredicted RBP1.65□□□□□ -2.14
CCDC58-204ENST00000479414 OR6C6A6NF89 314 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms