RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 PPYP01298 95 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 AADACP22760 399 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 HERV-K104P61576 105 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 RPS16P62249 146 aaKnown RBP16.22■□□□□ 0.19
VARS-224ENST00000479051 SLC35B1P78383 322 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 C5orf64Q2M2E5 130 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 C11orf44Q8N8P7 122 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 OR5AU1Q8NGC0 362 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 OR4X2Q8NGF9 303 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 SECTM1Q8WVN6 248 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 GIMAP1Q8WWP7 306 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 RBMXL1Q96E39 390 aaKnown RBP16.22■□□□□ 0.19
VARS-224ENST00000479051 RITA1Q96K30 269 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 GON7Q9BXV9 100 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 SLIRPQ9GZT3 109 aaKnown RBP16.22■□□□□ 0.19
VARS-224ENST00000479051 MIXL1Q9H2W2 232 aa16.22■□□□□ 0.19
VARS-224ENST00000479051 ZNF107Q9UII5 783 aaPredicted RBP16.22■□□□□ 0.19
VARS-224ENST00000479051 RBMX2Q9Y388 322 aaKnown RBP16.22■□□□□ 0.19
VARS-224ENST00000479051 IGKV1D-13A0A0B4J2D9 117 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 PSMB11A5LHX3 300 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 RRHO14718 337 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 NDUFA3O95167 84 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 SPDEFO95238 335 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 PMP2P02689 132 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 IGKV1-13P0DP09 117 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 CNTFRP26992 372 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 DUTP33316 252 aaKnown RBP16.21■□□□□ 0.19
VARS-224ENST00000479051 DYRK1AQ13627 763 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 C2orf68Q2NKX9 166 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 LIN54Q6MZP7 749 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 MCFD2Q8NI22 146 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 WIPF2Q8TF74 440 aaPredicted RBP16.21■□□□□ 0.19
VARS-224ENST00000479051 BORCS5Q969J3 196 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 C5orf30Q96GV9 206 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 DIRAS2Q96HU8 199 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 PRELID3BQ9Y3B1 194 aa16.21■□□□□ 0.19
VARS-224ENST00000479051 HLA-DRB1P01911 266 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 IGKV1-16P04430 117 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 HLA-DMAP28067 261 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 RFX2P48378 723 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 LINC00205P59089 165 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 FXYD4P59646 89 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 MRPS10P82664 201 aaKnown RBP16.2■□□□□ 0.18
VARS-224ENST00000479051 MSMO1Q15800 293 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 ACTBL2Q562R1 376 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 OVCH2Q7RTZ1 564 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 FCAMRQ8WWV6 532 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 HSD17B10Q99714 261 aaKnown RBP16.2■□□□□ 0.18
VARS-224ENST00000479051 SLC5A7Q9GZV3 580 aa16.2■□□□□ 0.18
VARS-224ENST00000479051 RBM38Q9H0Z9 239 aaKnown RBP16.2■□□□□ 0.18
VARS-224ENST00000479051 CD28P10747 220 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 HRH1P35367 487 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 LGALS7P47929 136 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 TSPAN5P62079 268 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 PRR31Q5SQ13 230 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 KCTD9Q7L273 389 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 STPG2Q8N412 459 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 ZBTB34Q8NCN2 500 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 BVESQ8NE79 360 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 DCUN1D5Q9BTE7 237 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 FBXL15Q9H469 300 aa16.19■□□□□ 0.18
VARS-224ENST00000479051 TET2Q6N021 2002 aaPredicted RBP16.19■□□□□ 0.18
VARS-224ENST00000479051 SHOXO15266 292 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 OPN1MWP04001 364 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 OPN1MW2P0DN77 364 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 OPN1MW3P0DN78 364 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 VDAC1P21796 283 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 IL18Q14116 193 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 PSG5Q15238 335 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 RNASE12Q5GAN4 147 aaKnown RBP16.18■□□□□ 0.18
VARS-224ENST00000479051 PYHIN1Q6K0P9 492 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 DHRS11Q6UWP2 260 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 ZNF66Q6ZN08 573 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 TMEM17Q86X19 198 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 OR6F1Q8NGZ6 308 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 OR52I2Q8NH67 350 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 HARBI1Q96MB7 349 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 NOL4LQ96MY1 436 aaPredicted RBP16.18■□□□□ 0.18
VARS-224ENST00000479051 ABHD1Q96SE0 405 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 HSPB9Q9BQS6 159 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 ZNF2Q9BSG1 426 aaPredicted RBP16.18■□□□□ 0.18
VARS-224ENST00000479051 NDUFA13Q9P0J0 144 aa16.18■□□□□ 0.18
VARS-224ENST00000479051 METTL1Q9UBP6 276 aaKnown RBP16.18■□□□□ 0.18
VARS-224ENST00000479051 CSF1P09603 554 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 TMEM177Q53S58 311 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 NDUFA11Q86Y39 141 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 LYSMD2Q8IV50 215 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 COMMD1Q8N668 190 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 TCTEX1D2Q8WW35 142 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 DDB2Q92466 427 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 NXF2Q9GZY0 626 aaKnown RBP16.17■□□□□ 0.18
VARS-224ENST00000479051 CCL28Q9NRJ3 127 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 TAS2R8Q9NYW2 309 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 MTFP1Q9UDX5 166 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 LINC00527Q9UJ94 153 aa16.17■□□□□ 0.18
VARS-224ENST00000479051 TCRBV4S1A1TA0A5B7 111 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 LINC01548A6NM66 108 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 LINC00473A8K010 186 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 GABARAPH6UMI1 98 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 FCGR3BO75015 233 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms