RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 EBI3Q14213 229 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 CDK10Q15131 360 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 TMEM17Q86X19 198 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 Q8N2B8 174 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 Q8N6K4 173 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.48□□□□□ -1.53
BRCA1-215ENST00000478531 OR5AP2Q8NGF4 316 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 OR5H2Q8NGV7 314 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 MCFD2Q8NI22 146 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 CHAC2Q8WUX2 184 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 SECTM1Q8WVN6 248 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 RITA1Q96K30 269 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 RASL11BQ9BPW5 248 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 SLIRPQ9GZT3 109 aaKnown RBP5.48□□□□□ -1.53
BRCA1-215ENST00000478531 SERTAD4Q9NUC0 356 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 WASHC3Q9Y3C0 194 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 OR2W1Q9Y3N9 320 aa5.48□□□□□ -1.53
BRCA1-215ENST00000478531 FGF16O43320 207 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 PROP1O75360 226 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 TUSC2O75896 110 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 IGKV1-16P04430 117 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 HRH1P35367 487 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 TAS2R46P59540 309 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 IL18Q14116 193 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 PLGLAQ15195 96 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 C21orf62-AS1Q17RA5 79 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 SHISA2Q6UWI4 295 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF645Q8N7E2 425 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 Q8N9W7 124 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF383Q8NA42 475 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 GPX8Q8TED1 209 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 DIRAS2Q96HU8 199 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 SCPEP1Q9HB40 452 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 KIAA1456Q9P272 454 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 LINC00527Q9UJ94 153 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 NBR2O15453 112 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 TNFSF12O43508 249 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 PPYP01298 95 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 MC5RP33032 325 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 RCVRNP35243 200 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 HERV-K104P61576 105 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 DGCR2P98153 550 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 CBX3Q13185 183 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 OR2B11Q5JQS5 317 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 SLC35E3Q7Z769 313 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 FAM71E2Q8N5Q1 922 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 OR5AN1Q8NGI8 311 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 OR52I2Q8NH67 350 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 NOL4LQ96MY1 436 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-215ENST00000478531 ABHD1Q96SE0 405 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 GPHA2Q96T91 129 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 CITED1Q99966 193 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 ZNF2Q9BSG1 426 aaPredicted RBP5.47□□□□□ -1.53
BRCA1-215ENST00000478531 PLSCR3Q9NRY6 295 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 SLC35D1Q9NTN3 355 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 TAS2R8Q9NYW2 309 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 ANAPC10Q9UM13 185 aa5.47□□□□□ -1.53
BRCA1-215ENST00000478531 TNCP24821 2201 aa5.46□□□□□ -1.53
BRCA1-215ENST00000478531 LINC00473A8K010 186 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 M0QYG6 137 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 FBXO24O75426 580 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 B3GALNT1O75752 331 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 DUTP33316 252 aaKnown RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 THBS3P49746 956 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 TSPAN5P62079 268 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 RPS16P62249 146 aaKnown RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 RTL8BQ17RB0 113 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 KCTD9Q7L273 389 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 CENPVQ7Z7K6 275 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 PDPNQ86YL7 162 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 TCTEX1D2Q8WW35 142 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 FCAMRQ8WWV6 532 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 HARBI1Q96MB7 349 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 HSPB9Q9BQS6 159 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 SLC5A7Q9GZV3 580 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 LIN7CQ9NUP9 197 aaKnown RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 KLK11Q9UBX7 282 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 RBMX2Q9Y388 322 aaKnown RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 MEGF8Q7Z7M0 2845 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 DPPA5A6NC42 116 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 LINC01548A6NM66 108 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF701M0R085 212 aaPredicted RBP5.46□□□□□ -1.54
BRCA1-215ENST00000478531 SULT1C2O00338 296 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 FCGR3BO75015 233 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 RBBP9O75884 186 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 SLC22A5O76082 557 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 CRYZL1O95825 349 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 IGLV2-14P01704 120 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 CD28P10747 220 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 DYRK1AQ13627 763 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 C5orf64Q2M2E5 130 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 TM4SF20Q53R12 229 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 KHDC1LQ5JSQ8 128 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 C10orf99Q6UWK7 81 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF818PQ6ZRF7 136 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 OVCH2Q7RTZ1 564 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 ZNF329Q86UD4 541 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 LYSMD2Q8IV50 215 aa5.46□□□□□ -1.54
BRCA1-215ENST00000478531 FOXRED2Q8IWF2 684 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms