RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-210	ENST00000478282	PRRG4	Q9BZD6	226 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	DIDO1	Q9BTC0	2240 aa	Known RBP	12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	RNF212B	A8MTL3	300 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	NUPR1	O60356	82 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	NGF	P01138	241 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	GCH1	P30793	250 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	RPL29	P47914	159 aa	Known RBP	12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	FREM1	Q5H8C1	2179 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	ASCL5	Q7RTU5	278 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	MRPL52	Q86TS9	123 aa	Known RBP	12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	AGBL5	Q8NDL9	886 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	CLN8	Q9UBY8	286 aa		12.52	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZNF705F	A8MVS1	300 aa	Predicted RBP	12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZNF705D	P0CH99	300 aa	Predicted RBP	12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZNF705B	P0CI00	300 aa	Predicted RBP	12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	FOXL1	Q12952	345 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282		Q6P435	159 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	BTNL3	Q6UXE8	466 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	OR10P1	Q8NGE3	313 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	UBALD1	Q8TB05	177 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZCCHC14	Q8WYQ9	949 aa	Known RBP	12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	TBX15	Q96SF7	602 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	DOCK11	Q5JSL3	2073 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	MRPL33	O75394	65 aa	Known RBP	12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	KLF7	O75840	302 aa	Predicted RBP	12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	SYNGR4	O95473	234 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	WNT5A	P41221	380 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	GNB1	P62873	340 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	GNG3	P63215	75 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	MSMO1	Q15800	293 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZNF709	Q8N972	641 aa		12.51	□□□□□ -0.41
U2AF1-210	ENST00000478282	OR5B21	A6NL26	309 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	DLL1	O00548	723 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	PDE6D	O43924	150 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	TRAPPC6A	O75865	159 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	CDC34	P49427	236 aa	Predicted RBP	12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	NHLH1	Q02575	133 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	REL	Q04864	619 aa	Predicted RBP	12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	NUFIP2	Q7Z417	695 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	TRAPPC2L	Q9UL33	140 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	HPRT1	P00492	218 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	RPLP1	P05386	114 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282		P0C879	139 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	DEFA4	P12838	97 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	UBE2N	P61088	152 aa	Known RBP	12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZNF497	Q6ZNH5	498 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZNF503-AS2	A6NEH8	195 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	LRRC30	A6NM36	301 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	MARCH11	A6NNE9	402 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	ANKRD30BL	A7E2S9	258 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	RHBDL1	O75783	438 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	EGR1	P18146	543 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	SOX8	P57073	446 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	VWC2	Q2TAL6	325 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	CST9LP1	Q5W188	147 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZNF705A	Q6ZN79	300 aa	Predicted RBP	12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	OR1L1	Q8NH94	360 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	SDSL	Q96GA7	329 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	LINC00470	Q9BZP3	86 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	PKIB	Q9C010	78 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	ELOVL5	Q9NYP7	299 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	MPC1	Q9Y5U8	109 aa		12.5	□□□□□ -0.41
U2AF1-210	ENST00000478282	DLEU1	O43261	78 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	CRYAA	P02489	173 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	SERPINA7	P05543	415 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	C1QTNF9	P0C862	333 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	OR3A1	P47881	315 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	IL11RA	Q14626	422 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	CMTM2	Q8TAZ6	248 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	TMEM208	Q9BTX3	173 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	MUC6	Q6W4X9	2439 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	ODAM	A1E959	279 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	RAMP3	O60896	148 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	KRAS	P01116	189 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	ADM	P35318	185 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	G6PC	P35575	357 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	CFAP54	Q96N23	3096 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	C17orf112	F2Z3M2	114 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	SIRPB1	O00241	398 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	ATP5G3	P48201	142 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	SGMS2	Q8NHU3	365 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	DTD1	Q8TEA8	209 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	DIRC2	Q96SL1	478 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	TMEM106B	Q9NUM4	274 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	IL17B	Q9UHF5	180 aa		12.49	□□□□□ -0.41
U2AF1-210	ENST00000478282	YPEL1	O60688	119 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	ZG16	O60844	167 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	NDUFB4	O95168	129 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	SFTPC	P11686	197 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	TRIP6	Q15654	476 aa	Known RBP	12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	POM121L2	Q96KW2	1035 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	YPEL2	Q96QA6	119 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	C20orf144	Q9BQM9	153 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	DERL1	Q9BUN8	251 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	KCNIP2	Q9NS61	270 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	IGKV3D-15	A0A087WSY6	115 aa		12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	FOXG1	P55316	489 aa	Predicted RBP	12.48	□□□□□ -0.41
U2AF1-210	ENST00000478282	YPEL3	P61236	119 aa	Predicted RBP	12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms