RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TNFSF12O43508 249 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 VENTXO95231 258 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 IGKV1D-33P01593 117 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 IGKV1-33P01594 117 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 APOA2P02652 100 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 CT45A6P0DMU7 189 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 CT45A5P0DMU8 189 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 CT45A7P0DMV0 189 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 ECI1P42126 302 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 THBS3P49746 956 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 UCP3P55916 312 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 HES1Q14469 280 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 LPCAT3Q6P1A2 487 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 TMEM86BQ8N661 226 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 ZNF383Q8NA42 475 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 ZBTB34Q8NCN2 500 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 OR13C8Q8NGS7 320 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 MARCH1Q8TCQ1 289 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 ADTRPQ96IZ2 230 aa12.3□□□□□ -0.44
SEC13-215ENST00000477547 C7orf50Q9BRJ6 194 aaKnown RBP12.3□□□□□ -0.44
SEC13-215ENST00000477547 A0A0A6YYJ9 748 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 NAP1L6A6NFF2 107 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 H0YJW9 148 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 H7C2Y5 167 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 RLN1P04808 185 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 GNRHRP30968 328 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 DUTP33316 252 aaKnown RBP12.29□□□□□ -0.44
SEC13-215ENST00000477547 CATR1Q13166 79 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 SLC9A3R2Q15599 337 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 PHLDA2Q53GA4 152 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 FBLN7Q53RD9 439 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 TMEM219Q86XT9 240 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 CMTM1Q8IZ96 169 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 BVESQ8NE79 360 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 PIFOQ8TCI5 191 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 TCTEX1D2Q8WW35 142 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 MRGPRFQ96AM1 343 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 AKR1E2Q96JD6 320 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 GPHA2Q96T91 129 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 HSD17B10Q99714 261 aaKnown RBP12.29□□□□□ -0.44
SEC13-215ENST00000477547 RSRP1Q9BUV0 290 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 CHIAQ9BZP6 476 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 SLC35D1Q9NTN3 355 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 PITPNC1Q9UKF7 332 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 WASHC3Q9Y3C0 194 aa12.29□□□□□ -0.44
SEC13-215ENST00000477547 LINC00473A8K010 186 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 LYRM1O43325 122 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 FAM106CPP0CH98 169 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 TMEM11P17152 192 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 PI3P19957 117 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 CD1BP29016 333 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 S100GP29377 79 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 LINC00205P59089 165 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 UBA52P62987 128 aaKnown RBP12.28□□□□□ -0.44
SEC13-215ENST00000477547 EIF4EBP1Q13541 118 aaPredicted RBP12.28□□□□□ -0.44
SEC13-215ENST00000477547 SURF2Q15527 256 aaPredicted RBP12.28□□□□□ -0.44
SEC13-215ENST00000477547 RTL8BQ17RB0 113 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 ABCA11PQ4W5N1 156 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 OR2B11Q5JQS5 317 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 ZNF66Q6ZN08 573 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 OR5AN1Q8NGI8 311 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 OR51H1Q8NH63 302 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 SLC2A9Q9NRM0 540 aa12.28□□□□□ -0.44
SEC13-215ENST00000477547 C14orf166Q9Y224 244 aaKnown RBP12.28□□□□□ -0.44
SEC13-215ENST00000477547 A6NDX4 124 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 FAM90A9PA6NNJ1 464 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 CLDN34H7C241 214 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 PLA2G10O15496 165 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 MC5RP33032 325 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 BTCP35070 178 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 CCR6P51684 374 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 RPL30P62888 115 aaKnown RBP12.27□□□□□ -0.45
SEC13-215ENST00000477547 CBX3Q13185 183 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 RBMS2Q15434 407 aaKnown RBP12.27□□□□□ -0.45
SEC13-215ENST00000477547 LIAT1Q6ZQX7 453 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 PDPNQ86YL7 162 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 OR2T10Q8NGZ9 312 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 ZFAND1Q8TCF1 268 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 DDB2Q92466 427 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 RBMXL1Q96E39 390 aaKnown RBP12.27□□□□□ -0.45
SEC13-215ENST00000477547 ZNF486Q96H40 463 aaPredicted RBP12.27□□□□□ -0.45
SEC13-215ENST00000477547 TBC1D24Q9ULP9 559 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 PRELID3BQ9Y3B1 194 aa12.27□□□□□ -0.45
SEC13-215ENST00000477547 CHST1O43916 411 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 GPR137BO60478 399 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 MOSP00540 346 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 CTSDP07339 412 aaPredicted RBP12.26□□□□□ -0.45
SEC13-215ENST00000477547 RNASE1P07998 156 aaKnown RBP12.26□□□□□ -0.45
SEC13-215ENST00000477547 PIGPP57054 158 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 ASAH1Q13510 395 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 HNF4GQ14541 408 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 C16orf87Q6PH81 154 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 THNSL2Q86YJ6 484 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 CCDC71LQ8N9Z2 235 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 EAF1Q96JC9 268 aaPredicted RBP12.26□□□□□ -0.45
SEC13-215ENST00000477547 SLC25A33Q9BSK2 321 aa12.26□□□□□ -0.45
SEC13-215ENST00000477547 LIN7CQ9NUP9 197 aaKnown RBP12.26□□□□□ -0.45
SEC13-215ENST00000477547 FCGR3BO75015 233 aa12.25□□□□□ -0.45
SEC13-215ENST00000477547 PGLYRP1O75594 196 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms