RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 NECAP1Q8NC96 275 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 R3HDM4Q96D70 268 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 WDYHV1Q96HA8 205 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 TAAR6Q96RI8 345 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 FKBP11Q9NYL4 201 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 C11orf94C9JXX5 98 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 K7ESF4 209 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 SH2D1BO14796 132 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 RAC2P15153 192 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 CXCL12P48061 93 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 PAFAH1B2P68402 229 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 EIF4EBP1Q13541 118 aaPredicted RBP11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 NUFIP2Q7Z417 695 aaKnown RBP11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 TGIF2LXQ8IUE1 241 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 DMRTC2Q8IXT2 367 aaPredicted RBP11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 APH1AQ96BI3 265 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 TMEM204Q9BSN7 226 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 PXMP4Q9Y6I8 212 aa11.4□□□□□ -0.58
HLA-DMA-208ENST00000477541 KIAA2026Q5HYC2 2103 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 ZNF891A8MT65 544 aaPredicted RBP11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 WDR1O75083 606 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 JMJD7P0C870 316 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 ZNF16P17020 682 aaPredicted RBP11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 IL3RAP26951 378 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 RANP62826 216 aaKnown RBP11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 RPP30P78346 268 aaKnown RBP11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 GABRA6Q16445 453 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 PPP1R32Q7Z5V6 425 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 LINC01551Q86U37 167 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 C17orf78Q8N4C9 275 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 DTD1Q8TEA8 209 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 TMEM37Q8WXS4 190 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 FAM173AQ9BQD7 235 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 IER2Q9BTL4 223 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 ELOVL1Q9BW60 279 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 PRRG4Q9BZD6 226 aa11.39□□□□□ -0.59
HLA-DMA-208ENST00000477541 TMEM30CPA0ZSE6 113 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 PAGE4O60829 102 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 WISP2O76076 250 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 OR2H2O95918 312 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 ESDP10768 282 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 AARDQ4LEZ3 155 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 FAM180AQ6UWF9 173 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 OR1K1Q8NGR3 316 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 NAGKQ9UJ70 344 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 TRAPPC1Q9Y5R8 145 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 ODAMA1E959 279 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 LHX2P50458 406 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 SELENOTP62341 195 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 SLC35E4Q6ICL7 350 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 GALMQ96C23 342 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 ZNF488Q96MN9 340 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 WDR83OSQ9Y284 106 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 LY96Q9Y6Y9 160 aa11.38□□□□□ -0.59
HLA-DMA-208ENST00000477541 A0A096LPE4 126 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 MDFIC2A0A1B0GVS7 189 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 A0A1W2PPZ6 126 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 OOEPA6NGQ2 149 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 NGFP01138 241 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 CLDN18P56856 261 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 SOX8P57073 446 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 SSPNQ14714 243 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 HLA-BQ31612 363 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 C20orf144Q9BQM9 153 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 DEPPQ9NTK1 212 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 WASF3Q9UPY6 502 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 SIT1Q9Y3P8 196 aa11.37□□□□□ -0.59
HLA-DMA-208ENST00000477541 A0A0U1RQK1 487 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 A0A1B0GWJ7 208 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 A0A1W2PR80 420 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 ZNF320A2RRD8 509 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 SELEP16581 610 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 RPL19P84098 196 aaKnown RBP11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 PLGLB1Q02325 96 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 RTP5Q14D33 572 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 FAM78BQ5VT40 261 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 SLC23A3Q6PIS1 610 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 TRAT1Q6PIZ9 186 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 TUSC5Q8IXB3 177 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 TMEM68Q96MH6 324 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 HSD17B10Q99714 261 aaKnown RBP11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 ZNF703Q9H7S9 590 aaPredicted RBP11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 GP6Q9HCN6 339 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 ELOVL5Q9NYP7 299 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 PI4KAP42356 2102 aa11.36□□□□□ -0.59
HLA-DMA-208ENST00000477541 ZFYVE26Q68DK2 2539 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 TRBV9A0A0B4J1U6 114 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 SIRPB1O00241 398 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 EREGO14944 169 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 KRASP01116 189 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 IGHV3-9P01782 118 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 SNRPCP09234 159 aaKnown RBP11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 OPRK1P41145 380 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 WNT5AP41221 380 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 TNFSF10P50591 281 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 TPPP2P59282 170 aa11.35□□□□□ -0.59
HLA-DMA-208ENST00000477541 GAGE1Q13065 139 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms