RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 VSIRQ9H7M9 311 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 SH2D2AQ9NP31 389 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 MMP26Q9NRE1 261 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 PRTFDC1Q9NRG1 225 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 CISHQ9NSE2 258 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 LYRM2Q9NU23 88 aaPredicted RBP1.93□□□□□ -2.1
XRN1-211ENST00000477237 RIMS3Q9UJD0 308 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 SCML2Q9UQR0 700 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 LSM5Q9Y4Y9 91 aaKnown RBP1.93□□□□□ -2.1
XRN1-211ENST00000477237 OR1A2Q9Y585 309 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 FLVCR1Q9Y5Y0 555 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 SHANK3Q9BYB0 1731 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 CFTRP13569 1480 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 RALGAPBQ86X10 1494 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 GLI2P10070 1586 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 UBR2Q8IWV8 1755 aa1.93□□□□□ -2.1
XRN1-211ENST00000477237 TANC1Q9C0D5 1861 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 RGS12O14924 1447 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 ANKARQ7Z5J8 1434 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 KIAA0556O60303 1618 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 TOP2BQ02880 1626 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 ADCY10Q96PN6 1610 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 LOC102724200A0A096LPH7 203 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 IGHV1-69-2A0A0G2JMI3 117 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 A0A0G2JMM0 328 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 A0A1W2PPB8 328 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 hADV38S2A0JD32 116 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 DHRS12A0PJE2 317 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 DAPL1A0PJW8 107 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 KIR3DP1A8MWS1 328 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 SHISA9B4DS77 424 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 C2CD4DB7Z1M9 353 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 C9JAW5 83 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 M0R233 179 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 SAP18O00422 153 aaKnown RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 ZNF593O00488 134 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 GABRPO00591 440 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 SH2D1BO14796 132 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 MYL12BO14950 172 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 RGS16O15492 202 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 DHRS3O75911 302 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 CDRT1O95170 752 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 OR2H2O95918 312 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 RENP00797 406 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 IGHG2P01859 326 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 TTRP02766 147 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 REG1AP05451 166 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 HLA-DQB2P05538 268 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 SOD3P08294 240 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 SCTP09683 121 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 GKN3PP0CG01 181 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 ZNF728P0DKX0 622 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 ATF1P18846 271 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 GPX3P22352 226 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 CA6P23280 308 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 EDNRAP25101 427 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 RPA3P35244 121 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 LHX2P50458 406 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 UBE2E1P51965 193 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 UBE2NP61088 152 aaKnown RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 OSTNP61366 133 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 RPS4XP62701 263 aaKnown RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 RPS27AP62979 156 aaKnown RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 GNG5P63218 68 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 GAGE2BQ13066 116 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 CLEC12BQ2HXU8 276 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 LGALSLQ3ZCW2 172 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 FAM106AQ4KMX7 169 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 GAGE2EQ4V326 116 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 PRR30Q53SZ7 412 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 LRRC10Q5BKY1 277 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 COA6Q5JTJ3 125 aaKnown RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 OR2T5Q6IEZ7 315 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 GAGE2AQ6NT46 116 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 ALKAL2Q6UX46 152 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 GOLT1AQ6ZVE7 132 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 MOB1BQ7L9L4 216 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 LINC01561Q8N1V8 128 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 RYBPQ8N488 228 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 FTMTQ8N4E7 242 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 PRELID2Q8N945 189 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 GPR26Q8NDV2 337 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 OR4K17Q8NGC6 315 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 OR2T29Q8NH02 315 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 C8orf46Q8TAG6 207 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 RNF128Q8TEB7 428 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 TMEM106AQ96A25 262 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 PLEKHB2Q96CS7 222 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 ZMYND19Q96E35 227 aaPredicted RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 SEC22AQ96IW7 307 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 UBE2E2Q96LR5 201 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 DERL3Q96Q80 235 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 OR4K3Q96R72 315 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 CLCC1Q96S66 551 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 LINC01587Q99440 93 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 PKMYT1Q99640 499 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 KIR2DL4Q99706 377 aa1.92□□□□□ -2.1
XRN1-211ENST00000477237 HSD17B10Q99714 261 aaKnown RBP1.92□□□□□ -2.1
XRN1-211ENST00000477237 HIST1H2BLQ99880 126 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms