RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 OR6C3Q9NZP0 311 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 GAB2Q9UQC2 676 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 SMG1Q96Q15 3661 aaKnown RBP9.52□□□□□ -0.89
NUP188-205ENST00000477069 IFNA5P01569 189 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 CD55P08174 381 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 GPR12P47775 334 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 HBG1P69891 147 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 HBG2P69892 147 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 ADIPOQQ15848 244 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 SPANXN5Q5MJ07 72 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 C1orf229Q6ZS94 237 aaPredicted RBP9.52□□□□□ -0.89
NUP188-205ENST00000477069 THNSL2Q86YJ6 484 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 TGIF2LYQ8IUE0 185 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 KDF1Q8NAX2 398 aaPredicted RBP9.52□□□□□ -0.89
NUP188-205ENST00000477069 PBDC1Q9BVG4 233 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 EIF5A2Q9GZV4 153 aaKnown RBP9.52□□□□□ -0.89
NUP188-205ENST00000477069 KIAA1456Q9P272 454 aa9.52□□□□□ -0.89
NUP188-205ENST00000477069 MARCH11A6NNE9 402 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 AKR1C8PQ5T2L2 129 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 ZNF788Q6ZQV5 615 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 DDB2Q92466 427 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 RARRES2Q99969 163 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 AIFM2Q9BRQ8 373 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 RSG1Q9BU20 258 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 WDR61Q9GZS3 305 aaKnown RBP9.51□□□□□ -0.89
NUP188-205ENST00000477069 LINC00574Q9H8X3 128 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 GNG12Q9UBI6 72 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 FBXO7Q9Y3I1 522 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 CADP27708 2225 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 TRAV1-1A0A0B4J248 108 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 SLC31A2O15432 143 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 EDDM3BP56851 147 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 BSPH1Q075Z2 132 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 LINC00469Q8N7U9 141 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 CD300LFQ8TDQ1 290 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 FAM234AQ9H0X4 552 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 CLN8Q9UBY8 286 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 USF3Q68DE3 2245 aa9.51□□□□□ -0.89
NUP188-205ENST00000477069 KBTBD11-OT1A0A1B0GTJ5 212 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 A0A1B0GV50 99 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 TNFSF4P23510 183 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 H2BFWTQ7Z2G1 175 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 WFDC8Q8IUA0 241 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 ZNF439Q8NDP4 499 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 SLC35B3Q9H1N7 401 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 GFOD1Q9NXC2 390 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 DCAF16Q9NXF7 216 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 FAM90A9PA6NNJ1 464 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 RBFOX2O43251 390 aaKnown RBP eCLIP9.5□□□□□ -0.89
NUP188-205ENST00000477069 ZG16O60844 167 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 TLE4Q04727 773 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 SLC38A11Q08AI6 406 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 RPL39P5Q59GN2 51 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 SSX8Q7RTT4 187 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 CENPVQ7Z7K6 275 aaPredicted RBP9.5□□□□□ -0.89
NUP188-205ENST00000477069 ZDHHC16Q969W1 377 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 R3HDM4Q96D70 268 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 PLPPR2Q96GM1 343 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 VSIRQ9H7M9 311 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 NDRG3Q9UGV2 375 aa9.5□□□□□ -0.89
NUP188-205ENST00000477069 RBFOX3A6NFN3 312 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 PCP4L1A6NKN8 68 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 HPRT1P00492 218 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 OR9G9P0C7N8 305 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 ZNF726P1Q15940 193 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 DTD1Q8TEA8 209 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 CORO2AQ92828 525 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 DIRC2Q96SL1 478 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 ZNF665Q9H7R5 613 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 MSRB2Q9Y3D2 182 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 HCFC1P51610 2035 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 C17orf100A8MU93 164 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 OR4A8P0C604 315 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 PAX6P26367 422 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 ICAM4Q14773 271 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 VWC2Q2TAL6 325 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 PDLIM3Q53GG5 364 aaPredicted RBP9.49□□□□□ -0.89
NUP188-205ENST00000477069 CT45A1Q5HYN5 189 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 ETV3LQ6ZN32 361 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 CLDND2Q8NHS1 167 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 CT45A3Q8NHU0 189 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 SCGB1C1Q8TD33 95 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 ZNF251Q9BRH9 671 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 RPRMQ9NS64 109 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 SH3BGRL2Q9UJC5 107 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 M0R1X1 148 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 FCGR3BO75015 233 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 GYPAP02724 150 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 SERF2P84101 59 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 ZNF506Q5JVG8 444 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 SSX7Q7RTT5 188 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 FAM216BQ8N7L0 139 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 TAF15Q92804 592 aaKnown RBP eCLIP9.49□□□□□ -0.89
NUP188-205ENST00000477069 RBMXL1Q96E39 390 aaKnown RBP9.49□□□□□ -0.89
NUP188-205ENST00000477069 CCL13Q99616 98 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 QTRT1Q9BXR0 403 aaKnown RBP9.49□□□□□ -0.89
NUP188-205ENST00000477069 TIMM9Q9Y5J7 89 aa9.49□□□□□ -0.89
NUP188-205ENST00000477069 ZGRF1Q86YA3 2104 aa9.48□□□□□ -0.89
NUP188-205ENST00000477069 KALRNO60229 2985 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms