RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 DIABLOQ9NR28 239 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 SLC35D1Q9NTN3 355 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 SPATA2Q9UM82 520 aa12.69□□□□□ -0.38
COL1A1-205ENST00000476387 TRAV18A0A075B6X5 111 aa12.68□□□□□ -0.38
COL1A1-205ENST00000476387 IGHV7-81A0A0B4J1V7 117 aa12.68□□□□□ -0.38
COL1A1-205ENST00000476387 ATP6V0E1O15342 81 aa12.68□□□□□ -0.38
COL1A1-205ENST00000476387 PROP1O75360 226 aa12.68□□□□□ -0.38
COL1A1-205ENST00000476387 RPS16P62249 146 aaKnown RBP12.68□□□□□ -0.38
COL1A1-205ENST00000476387 H1FOOQ8IZA3 346 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-205ENST00000476387 ABHD5Q8WTS1 349 aa12.68□□□□□ -0.38
COL1A1-205ENST00000476387 SDHAF2Q9NX18 166 aa12.68□□□□□ -0.38
COL1A1-205ENST00000476387 TRIM64CA6NLI5 447 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 SPDEFO95238 335 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 IGHG4P01861 327 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 IGKV1-16P04430 117 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 RPLP1P05386 114 aaKnown RBP12.67□□□□□ -0.38
COL1A1-205ENST00000476387 HOXD3P31249 432 aaPredicted RBP12.67□□□□□ -0.38
COL1A1-205ENST00000476387 CFHR3Q02985 330 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 CNIH2Q6PI25 160 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 C18orf65Q6ZTR6 163 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 RNF152Q8N8N0 203 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 FLYWCH2Q96CP2 140 aaKnown RBP12.67□□□□□ -0.38
COL1A1-205ENST00000476387 METTL1Q9UBP6 276 aaKnown RBP12.67□□□□□ -0.38
COL1A1-205ENST00000476387 ZMAT5Q9UDW3 170 aaKnown RBP12.67□□□□□ -0.38
COL1A1-205ENST00000476387 GAB2Q9UQC2 676 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 WSB1Q9Y6I7 421 aa12.67□□□□□ -0.38
COL1A1-205ENST00000476387 TRAV41A0A0B4J266 112 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 WI2-2373I1.2A0A1W2PRP0 233 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 SSX5O60225 188 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 RPS19P39019 145 aaKnown RBP12.66□□□□□ -0.38
COL1A1-205ENST00000476387 LINC00205P59089 165 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 ARPC4P59998 168 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 TAGLNQ01995 201 aaKnown RBP12.66□□□□□ -0.38
COL1A1-205ENST00000476387 PSG5Q15238 335 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 RTL8BQ17RB0 113 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 ECSCRQ19T08 205 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 UBE2NLQ5JXB2 153 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 ZNF660Q6AZW8 331 aaPredicted RBP12.66□□□□□ -0.38
COL1A1-205ENST00000476387 TMEM65Q6PI78 240 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 LCNL1Q6ZST4 164 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 ADTRPQ96IZ2 230 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 FUNDC2Q9BWH2 189 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 ANXA10Q9UJ72 324 aa12.66□□□□□ -0.38
COL1A1-205ENST00000476387 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 G3V318 75 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 CCL24O00175 119 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 NFYAP23511 347 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-205ENST00000476387 CDX1P47902 265 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-205ENST00000476387 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-205ENST00000476387 NDPQ00604 133 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 DCTN2Q13561 401 aaKnown RBP12.65□□□□□ -0.38
COL1A1-205ENST00000476387 BEST4Q8NFU0 473 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 S100A16Q96FQ6 103 aaKnown RBP12.65□□□□□ -0.38
COL1A1-205ENST00000476387 RAX2Q96IS3 184 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 HARBI1Q96MB7 349 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 CLCC1Q96S66 551 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 OR2W1Q9Y3N9 320 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 A3GALT2U3KPV4 340 aa12.65□□□□□ -0.38
COL1A1-205ENST00000476387 J3QRK9 145 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 SLC25A17O43808 307 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 SLC22A5O76082 557 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 RRASP10301 218 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 PSMB8P28062 276 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 NCS1P62166 190 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 CX3CL1P78423 397 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 DEFB121Q5J5C9 76 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 ZNF645Q8N7E2 425 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 TCTEX1D1Q8N7M0 179 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 SAMD12Q8N8I0 201 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 OR13F1Q8NGS4 319 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 SLC25A46Q96AG3 418 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 C5orf30Q96GV9 206 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 AUNIPQ9H7T9 357 aa12.64□□□□□ -0.39
COL1A1-205ENST00000476387 SHOXO15266 292 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 XRCC3O43542 346 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 CA2P00918 260 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 PPIFP30405 207 aaKnown RBP12.63□□□□□ -0.39
COL1A1-205ENST00000476387 CBX5P45973 191 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 LGALS7P47929 136 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 CRIP2P52943 208 aaPredicted RBP12.63□□□□□ -0.39
COL1A1-205ENST00000476387 RAB25P57735 213 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
COL1A1-205ENST00000476387 VAX1Q5SQQ9 334 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 TMEM69Q5SWH9 247 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 BVESQ8NE79 360 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 KCTD12Q96CX2 325 aaKnown RBP12.63□□□□□ -0.39
COL1A1-205ENST00000476387 IFT46Q9NQC8 304 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 FOXA2Q9Y261 457 aaPredicted RBP12.63□□□□□ -0.39
COL1A1-205ENST00000476387 FBXO7Q9Y3I1 522 aa12.63□□□□□ -0.39
COL1A1-205ENST00000476387 A0A1W2PN81 502 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 FCN1O00602 326 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 HLA-DQB1P01920 261 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 SMIM18P0DKX4 95 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 DUTP33316 252 aaKnown RBP12.62□□□□□ -0.39
COL1A1-205ENST00000476387 CHRNA7P36544 502 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 VBP1P61758 197 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 ZNF562Q6V9R5 426 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 PPP1R27Q86WC6 154 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 HOGA1Q86XE5 327 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms