RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MBP02144 154 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 ISG15P05161 165 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 HOXC4P09017 264 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 FAM157CP0CG43 387 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 COX6A1P12074 109 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TBPP20226 339 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 VDAC1P21796 283 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 ARL3P36405 182 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 OR5I1Q13606 314 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 MST1LQ2TV78 715 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 ETFRF1Q6IPR1 90 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM251Q8N6I4 163 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 MRPL30Q8TCC3 161 aaKnown RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 ST6GALNAC6Q969X2 333 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 AQP10Q96PS8 301 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TRAPPC1Q9Y5R8 145 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TMSB15BA0A087X1C1 80 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 LRP5LA4QPB2 252 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 C11orf94C9JXX5 98 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 CLDN34H7C241 214 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 J3KRW8 73 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 SNAI2O43623 268 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 SCGB2A1O75556 95 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM50AO95807 157 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 IER3P46695 156 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TAS2R30P59541 319 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 GNG3P63215 75 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 SSBP1Q04837 148 aaKnown RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 BSXQ3C1V8 233 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 UNQ6494/PRO21346Q6UXR6 183 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 Q6ZRM9 215 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 MOGAT3Q86VF5 341 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 CISD2Q8N5K1 135 aaKnown RBP4.24□□□□□ -1.73
CCDC39-204ENST00000476379 OR4P4Q8NGL7 312 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 R3HDM4Q96D70 268 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM68Q96MH6 324 aa4.24□□□□□ -1.73
CCDC39-204ENST00000476379 IGKV3-7A0A075B6H7 116 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF503-AS2A6NEH8 195 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 SH2D1BO14796 132 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 SOD3P08294 240 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 CBLN1P23435 193 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 F2RP25116 425 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ATP5G3P48201 142 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 PPP1CBP62140 327 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 CATR1Q13166 79 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 FAM27BQ5VT28 67 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 FAM166AQ6J272 317 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 BTNL8Q6UX41 500 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 C19orf35Q6ZS72 473 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ZNF573Q86YE8 665 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 SELENOHQ8IZQ5 122 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 FGFRL1Q8N441 504 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 NFAM1Q8NET5 270 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 SNIP1Q8TAD8 396 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 APOBEC3DQ96AK3 386 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 BOD1Q96IK1 185 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 HSD17B10Q99714 261 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 MCRIP2Q9BUT9 160 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 TTTY12Q9BZ98 90 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 PARP11Q9NR21 331 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ZMAT5Q9UDW3 170 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 VPS13CQ709C8 3753 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 TRGV5A0A0B4J1U4 118 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 TMPRSS2O15393 492 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 IL2RAP01589 272 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 RPS2P15880 293 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ORM2P19652 201 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 RAB4AP20338 218 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 TFPI2P48307 235 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 Q0VFX4 171 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 MSMO1Q15800 293 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 PYY3Q5JQD4 70 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 TRAT1Q6PIZ9 186 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 C15orf54Q8N8G6 183 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 SGMS2Q8NHU3 365 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 RTL8AQ9BWD3 113 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 GPR87Q9BY21 358 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM222Q9H0R3 208 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 BARX1Q9HBU1 254 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 TAAR3PQ9P1P4 343 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 METRNQ9UJH8 293 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 MUC22E2RYF6 1773 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 PRR19A6NJB7 356 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 C17orf98A8MV24 154 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 F6UZH7 168 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 RRHO14718 337 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 HBE1P02100 147 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 DANCRP0C864 163 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 COX7A1P24310 79 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 MDH2P40926 338 aaKnown RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 HES1Q14469 280 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 TMEM241Q24JQ0 296 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 DOLPP1Q86YN1 238 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 ZIC4Q8N9L1 334 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 PLPPR1Q8TBJ4 325 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 DTD1Q8TEA8 209 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 GNPNAT1Q96EK6 184 aaPredicted RBP4.23□□□□□ -1.73
CCDC39-204ENST00000476379 CITED1Q99966 193 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 PMCHL2Q9BQD1 86 aa4.23□□□□□ -1.73
CCDC39-204ENST00000476379 NAT8BQ9UHF3 227 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms