RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 HES4Q9HCC6 221 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 LRFN1Q9P244 771 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 HSPB7Q9UBY9 170 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 VAX2Q9UIW0 290 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 SH3BGRL2Q9UJC5 107 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 PITPNC1Q9UKF7 332 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 KLF13Q9Y2Y9 288 aaPredicted RBP5.76□□□□□ -1.49
UBR4-212ENST00000475973 MED12Q93074 2177 aa5.76□□□□□ -1.49
UBR4-212ENST00000475973 LRRK2Q5S007 2527 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 MAST4O15021 2626 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 TGIF2-C20orf24A0A0A6YYL0 155 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 OR5H1A6NKK0 313 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 G3V3Y1 287 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 TRAPPC2LH3BP13 241 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 J3QT63 122 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 CCL21O00585 134 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 SYNGR1O43759 233 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 SOX15O60248 233 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 GGCTO75223 188 aaKnown RBP5.75□□□□□ -1.49
UBR4-212ENST00000475973 NEURL1O76050 574 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 KBTBD11O94819 623 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 CNOT4O95628 575 aaKnown RBP5.75□□□□□ -1.49
UBR4-212ENST00000475973 IFNA5P01569 189 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 IGKV1D-33P01593 117 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 IGKV1-33P01594 117 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 TRGC2P03986 189 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 P04436 131 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 WNT5AP41221 380 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 CA7P43166 264 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 HAAOP46952 286 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 CYB561P49447 251 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 BRWD1-AS2P59051 145 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 SSTP61278 116 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 VAMP2P63027 116 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 GNG3P63215 75 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 PMP22Q01453 160 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 PDCD1Q15116 288 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 LBHQ53QV2 105 aaPredicted RBP5.75□□□□□ -1.49
UBR4-212ENST00000475973 TMEM41BQ5BJD5 291 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 STX12Q86Y82 276 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 RPP25LQ8N5L8 163 aaKnown RBP5.75□□□□□ -1.49
UBR4-212ENST00000475973 BEND2Q8NDZ0 799 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 OR51G1Q8NGK1 321 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 ABHD3Q8WU67 409 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 TAF15Q92804 592 aaKnown RBP eCLIP5.75□□□□□ -1.49
UBR4-212ENST00000475973 SLAMF9Q96A28 289 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 OR4C12Q96R67 309 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 HIST1H2BLQ99880 126 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 MAGT1Q9H0U3 335 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 VSIRQ9H7M9 311 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 ZNF703Q9H7S9 590 aaPredicted RBP5.75□□□□□ -1.49
UBR4-212ENST00000475973 CHODLQ9H9P2 273 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 IL36RNQ9UBH0 155 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 NCKAP5O14513 1909 aa5.75□□□□□ -1.49
UBR4-212ENST00000475973 PTPN13Q12923 2485 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 KLRC4-KLRK1H3BQV0 150 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 PRRG2O14669 202 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 MLNRO43193 412 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 VENTXO95231 258 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 SP1P08047 785 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 PGA5P0DJD9 388 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 PSG2P11465 335 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 CD99P14209 185 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 ADMP35318 185 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 FOXG1P55316 489 aaPredicted RBP5.74□□□□□ -1.49
UBR4-212ENST00000475973 GNB2P62879 340 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 SPINK14Q6IE38 97 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 TMEM144Q7Z5S9 345 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 TMEM183AQ8IXX5 376 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 Q8IYB0 196 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 C1orf87Q8N0U7 546 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 FAM58AQ8N1B3 248 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 ZNF383Q8NA42 475 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 OR4X1Q8NH49 305 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 ITLN2Q8WWU7 325 aaPredicted RBP5.74□□□□□ -1.49
UBR4-212ENST00000475973 BCL2L2Q92843 193 aaPredicted RBP5.74□□□□□ -1.49
UBR4-212ENST00000475973 RAB1CQ92928 201 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 RAB24Q969Q5 203 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 C5orf30Q96GV9 206 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 C1orf159Q96HA4 380 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 IMMP2LQ96T52 175 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 GPR61Q9BZJ8 451 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 ZNF665Q9H7R5 613 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 NAT8Q9UHE5 227 aa5.74□□□□□ -1.49
UBR4-212ENST00000475973 FLNCQ14315 2725 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 CTXND1A0A1B0GTU2 59 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 FAM90A9PA6NNJ1 464 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 SLC33A1O00400 549 aaPredicted RBP5.73□□□□□ -1.49
UBR4-212ENST00000475973 PPP1R2P9O14990 202 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 MRPL33O75394 65 aaKnown RBP5.73□□□□□ -1.49
UBR4-212ENST00000475973 LY86O95711 162 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 IL18BPO95998 194 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 NGFP01138 241 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 COX6B1P14854 86 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 OMGP23515 440 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 S100GP29377 79 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 GPM6AP51674 278 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 NDUFA6P56556 154 aa5.73□□□□□ -1.49
UBR4-212ENST00000475973 PKIAP61925 76 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms