RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 STHQ8IWL8 128 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 SSC4DQ8WTU2 575 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 FAM168AQ92567 244 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 LINC01587Q99440 93 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 A0A1W2PQM1 296 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 LCN2P80188 198 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 ZNF418Q8TF45 676 aaPredicted RBP12.34□□□□□ -0.43
SSPO-205ENST00000475488 SFRP2Q96HF1 295 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 OR4C45A6NMZ5 311 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 CEACAM21Q3KPI0 293 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 JMJD8Q96S16 334 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 TOMM7Q9P0U1 55 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 RBM11P57052 281 aaKnown RBP12.34□□□□□ -0.43
SSPO-205ENST00000475488 NCMAPQ5T1S8 102 aa12.34□□□□□ -0.43
SSPO-205ENST00000475488 RBMY1BA6NDE4 496 aaKnown RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 RBMY1EA6NEQ0 496 aaKnown RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 RBMY1DP0C7P1 496 aaKnown RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 RBMY1A1P0DJD3 496 aaKnown RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 RBMY1CP0DJD4 496 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 F11RQ9Y624 299 aaKnown RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 HRKO00198 91 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 PHLDA1Q8WV24 401 aaPredicted RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 CLEC7AQ9BXN2 247 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 TMEM136Q6ZRR5 245 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 MRPL24Q96A35 216 aaKnown RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 HOXA6P31267 233 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 LINC01560Q8TB33 94 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 HDHD3Q9BSH5 251 aaPredicted RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 GAGE10A6NGK3 116 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 MPV17P39210 176 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 ISOC2Q96AB3 205 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 CHST5Q9GZS9 411 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 DSPPQ9NZW4 1301 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 CD1AP06126 327 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 PLP1P60201 277 aa12.33□□□□□ -0.44
SSPO-205ENST00000475488 SSBP3Q9BWW4 388 aaPredicted RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 ZNF430Q9H8G1 570 aaPredicted RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 SOX21Q9Y651 276 aaPredicted RBP12.33□□□□□ -0.44
SSPO-205ENST00000475488 NRXN3Q9Y4C0 1643 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 SELENOTP62341 195 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 MGAT2Q10469 447 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 FXYD3Q14802 87 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 C17orf47Q8NEP4 570 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 VDAC2P45880 294 aaPredicted RBP12.32□□□□□ -0.44
SSPO-205ENST00000475488 RND2P52198 227 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 TMEM177Q53S58 311 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 TMEM70Q9BUB7 260 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 IGLV3-16A0A075B6K0 115 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 H7C1H1 209 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 SLC6A13Q9NSD5 602 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 PEMTQ9UBM1 199 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 CFDP00746 253 aaPredicted RBP12.32□□□□□ -0.44
SSPO-205ENST00000475488 RBKSQ9H477 322 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 NPIPB11E5RHQ5 1161 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 OR2H2O95918 312 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 WNT2BQ93097 391 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 QTRT1Q9BXR0 403 aaKnown RBP12.32□□□□□ -0.44
SSPO-205ENST00000475488 IFT22Q9H7X7 185 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 HMSDA8MTL9 139 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 CRPP02741 224 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 PAPPA-AS1Q5QFB9 102 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 DNM1P46Q6ZS02 220 aa12.32□□□□□ -0.44
SSPO-205ENST00000475488 NXT2Q9NPJ8 142 aaKnown RBP12.32□□□□□ -0.44
SSPO-205ENST00000475488 LAMB2P55268 1798 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 LINC00862A6NCI5 91 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 PNKDQ8N490 385 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 SRSF12Q8WXF0 261 aaKnown RBP12.31□□□□□ -0.44
SSPO-205ENST00000475488 MS4A3Q96HJ5 214 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 FANCMQ8IYD8 2048 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 ZNHIT1O43257 154 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 PLPPR5Q32ZL2 321 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 SPATA45Q537H7 98 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 C9orf40Q8IXQ3 194 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 LINC00470Q9BZP3 86 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 RTTNQ86VV8 2226 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 FOXI3A8MTJ6 420 aaPredicted RBP12.31□□□□□ -0.44
SSPO-205ENST00000475488 UPK3AO75631 287 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 EFNB2P52799 333 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 ZNF385AQ96PM9 386 aaKnown RBP12.31□□□□□ -0.44
SSPO-205ENST00000475488 H3BQ15 152 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 SFXN3Q9BWM7 321 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 AKIP1Q9NQ31 210 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 PI4KAP42356 2102 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 PATJQ8NI35 1801 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 PROB1E7EW31 1015 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 CDC42EP2O14613 210 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 ST6GALNAC2Q9UJ37 374 aa12.31□□□□□ -0.44
SSPO-205ENST00000475488 TRBV7-9A0A0J9YWB2 115 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 CNTFRP26992 372 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 TMEM170BQ5T4T1 132 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 TCF24Q7RTU0 167 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 VN1R4Q7Z5H5 301 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 OR4D5Q8NGN0 318 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 AMY1AP04745 511 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 FGF9P31371 208 aaPredicted RBP12.3□□□□□ -0.44
SSPO-205ENST00000475488 ZIC1Q15915 447 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 ABLIM2Q6H8Q1 611 aa12.3□□□□□ -0.44
SSPO-205ENST00000475488 RGP1Q92546 391 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms