RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 HSP90B2PQ58FF3 399 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 N4BP2L1Q5TBK1 243 aaPredicted RBP1.17□□□□□ -2.22
LTN1-204ENST00000475344 SDHAF4Q5VUM1 108 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 C2orf91Q6ZV80 131 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 SLC35F6Q8N357 371 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 PPCDCQ96CD2 204 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 UPF3BQ9BZI7 483 aaKnown RBP1.17□□□□□ -2.22
LTN1-204ENST00000475344 SLC22A4Q9H015 551 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 WDR54Q9H977 334 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 EMC3Q9P0I2 261 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 KLK5Q9Y337 293 aaPredicted RBP1.17□□□□□ -2.22
LTN1-204ENST00000475344 ZFHX2Q9C0A1 2572 aaPredicted RBP1.17□□□□□ -2.22
LTN1-204ENST00000475344 SLX4Q8IY92 1834 aa1.17□□□□□ -2.22
LTN1-204ENST00000475344 LAMB2P55268 1798 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 MED13Q9UHV7 2174 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 C11orf86A6NJI1 115 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 OR11H12B2RN74 326 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 MT-CO2P00403 227 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 OCMP0CE72 109 aaPredicted RBP1.16□□□□□ -2.22
LTN1-204ENST00000475344 PET100P0DJ07 73 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 CRYBB3P26998 211 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 HINT1P49773 126 aaPredicted RBP1.16□□□□□ -2.22
LTN1-204ENST00000475344 UBE2G2P60604 165 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 SKP1P63208 163 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 TMEM267Q0VDI3 215 aaPredicted RBP1.16□□□□□ -2.22
LTN1-204ENST00000475344 DNM1P34Q6PK57 102 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 Q6ZTI0 123 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 ATP5L2Q7Z4Y8 100 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 LHFPL1Q86WI0 220 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 FUNDC1Q8IVP5 155 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 DEFB119Q8N690 84 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 CNEP1R1Q8N9A8 125 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 OR11H2Q8NH07 326 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 OR10D3Q8NH80 312 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 CLDND2Q8NHS1 167 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 Q8WTZ3 238 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 ZNF514Q96K75 400 aaPredicted RBP1.16□□□□□ -2.22
LTN1-204ENST00000475344 SLC35G5Q96KT7 338 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 PACRGQ96M98 296 aaPredicted RBP1.16□□□□□ -2.22
LTN1-204ENST00000475344 TMEM222Q9H0R3 208 aa1.16□□□□□ -2.22
LTN1-204ENST00000475344 FREM1Q5H8C1 2179 aa1.15□□□□□ -2.22
LTN1-204ENST00000475344 MALRD1Q5VYJ5 2156 aa1.15□□□□□ -2.22
LTN1-204ENST00000475344 TRGV5A0A0B4J1U4 118 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 GOLGA6L10A6NI86 522 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 MRASO14807 208 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 UBE2L6O14933 153 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 AZIN1O14977 448 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 ATP8B1O43520 1251 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 NPYP01303 97 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 ATP5G1P05496 136 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 GPX1P07203 203 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 ZNF728P0DKX0 622 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 RBM11P57052 281 aaKnown RBP1.15□□□□□ -2.23
LTN1-204ENST00000475344 TAS2R30P59541 319 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 FABP5Q01469 135 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 MGAT3Q09327 533 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 TPRXLQ17RH7 258 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 CD302Q8IX05 232 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 OR4X2Q8NGF9 303 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 OR5J2Q8NH18 312 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 C7orf50Q9BRJ6 194 aaKnown RBP1.15□□□□□ -2.23
LTN1-204ENST00000475344 MROQ9BYG7 248 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 SLC2A9Q9NRM0 540 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 A0A1W2PP64 1363 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 PXDNLA1KZ92 1463 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 THSD7AQ9UPZ6 1657 aa1.15□□□□□ -2.23
LTN1-204ENST00000475344 PCDH15Q96QU1 1955 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 A0A1W2PQD3 144 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 HPGDSO60760 199 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 CXCL2P19875 107 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 CXCL3P19876 107 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 SERPINB10P48595 397 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 HPCAP84074 193 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 GNA12Q03113 381 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 DMTNQ08495 405 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 UAP1Q16222 522 aaPredicted RBP1.14□□□□□ -2.23
LTN1-204ENST00000475344 PDPK2PQ6A1A2 396 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 DRAM2Q6UX65 266 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 FAM19A5Q7Z5A7 132 aaPredicted RBP1.14□□□□□ -2.23
LTN1-204ENST00000475344 C10orf126Q8N4M7 172 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 SMCR5Q8TEV8 140 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 DNAJB3Q8WWF6 145 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 DCUN1D5Q9BTE7 237 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 HES4Q9HCC6 221 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 BABAM2Q9NXR7 383 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 CCDC88CQ9P219 2028 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 CUL9Q8IWT3 2517 aa1.14□□□□□ -2.23
LTN1-204ENST00000475344 PTPRSQ13332 1948 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 DICER1Q9UPY3 1922 aaKnown RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 DENND4BO75064 1496 aaPredicted RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 TRAV41A0A0B4J266 112 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 TINCRA0A1B0GVN0 87 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 MDFIC2A0A1B0GVS7 189 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 A0A1B0GW54 56 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 C5orf49A4QMS7 147 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 J3QQQ9 107 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 COCHO43405 550 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 DDTP30046 118 aa1.13□□□□□ -2.23
LTN1-204ENST00000475344 RPL27AP46776 148 aaKnown RBP1.13□□□□□ -2.23
LTN1-204ENST00000475344 IDH3GP51553 393 aaPredicted RBP1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms