RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 IGKV1D-33P01593 117 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 IGKV1-33P01594 117 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 IGKV1-16P04430 117 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 IL3RAP26951 378 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 CNTFRP26992 372 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 CD1BP29016 333 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 GNRHRP30968 328 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 DUTP33316 252 aaKnown RBP5.56□□□□□ -1.52
LIMD1-204ENST00000474665 GPR12P47775 334 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 LUMP51884 338 aaPredicted RBP5.56□□□□□ -1.52
LIMD1-204ENST00000474665 F2RL1P55085 397 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 ACTBP60709 375 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 BLCAPP62952 87 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 PYDC2Q56P42 97 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 CCDC144NLQ6NUI1 221 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 FAM71F2Q6NXP2 309 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 STEAP1BQ6NZ63 245 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF818PQ6ZRF7 136 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 LINC00299Q6ZSB3 139 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 Q8N402 240 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.56□□□□□ -1.52
LIMD1-204ENST00000474665 OR4C16Q8NGL9 310 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 SECTM1Q8WVN6 248 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 CAPSLQ8WWF8 208 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 MOB3AQ96BX8 217 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 JMJD8Q96S16 334 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF2Q9BSG1 426 aaPredicted RBP5.56□□□□□ -1.52
LIMD1-204ENST00000474665 C1RLQ9NZP8 487 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 PIPOXQ9P0Z9 390 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF221Q9UK13 617 aa5.56□□□□□ -1.52
LIMD1-204ENST00000474665 SH2D7A6NKC9 451 aaPredicted RBP5.55□□□□□ -1.52
LIMD1-204ENST00000474665 SRRM4A7MD48 611 aaKnown RBP5.55□□□□□ -1.52
LIMD1-204ENST00000474665 TXNL1O43396 289 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 RAB3DO95716 219 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 VSIG10L2P0DP72 767 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 TBPP20226 339 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 BRS3P32247 399 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 TAS2R19P59542 299 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 FXYD4P59646 89 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 MRGPRG-AS1Q2M3A8 158 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 RNASE10Q5GAN6 216 aaKnown RBP5.55□□□□□ -1.52
LIMD1-204ENST00000474665 SPANXN2Q5MJ10 180 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 Q6ZSV7 163 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 TMEM17Q86X19 198 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF645Q8N7E2 425 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 GDPD1Q8N9F7 314 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 OR13C8Q8NGS7 320 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 RBM14Q96PK6 669 aaKnown RBP5.55□□□□□ -1.52
LIMD1-204ENST00000474665 S1PR3Q99500 378 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 SLC5A7Q9GZV3 580 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 GHITMQ9H3K2 345 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 SIGLEC9Q9Y336 463 aa5.55□□□□□ -1.52
LIMD1-204ENST00000474665 LINC01548A6NM66 108 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 PLA2G10O15496 165 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 TNFSF12O43508 249 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 TSPAN9O75954 239 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 OR2F2O95006 317 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 MOSP00540 346 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 IGLV2-23P01705 113 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 CSF1P09603 554 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 FAM106CPP0CH98 169 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 AKAIN1P0CW23 69 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 HKR1P10072 659 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 TMEM11P17152 192 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 PI3P19957 117 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 BTCP35070 178 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 UCP3P55916 312 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 SSBP2P81877 361 aaPredicted RBP5.54□□□□□ -1.52
LIMD1-204ENST00000474665 IFITM3Q01628 133 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF45Q02386 682 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 MSMO1Q15800 293 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 ACTBL2Q562R1 376 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 C11orf88Q6PI97 169 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 Q8N2B8 174 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 ARRDC1Q8N5I2 433 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 FAM71E2Q8N5Q1 922 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 C5orf56Q8N8D9 126 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 Q8N9W7 124 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 BVESQ8NE79 360 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 OR51S1Q8NGJ8 323 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 OR6F1Q8NGZ6 308 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 OR2T10Q8NGZ9 312 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 TERB2Q8NHR7 220 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 SLC25A33Q9BSK2 321 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 RSRP1Q9BUV0 290 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 ZNF702PQ9H963 129 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 HRASLSQ9HDD0 168 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 ABCB10Q9NRK6 738 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 TAS2R8Q9NYW2 309 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 RBM7Q9Y580 266 aaKnown RBP5.54□□□□□ -1.52
LIMD1-204ENST00000474665 RYR2Q92736 4967 aa5.54□□□□□ -1.52
LIMD1-204ENST00000474665 CMYA5Q8N3K9 4069 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 BTBD17A6NE02 478 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 FCN1O00602 326 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 RAMP3O60896 148 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 PGLYRP1O75594 196 aaPredicted RBP5.53□□□□□ -1.52
LIMD1-204ENST00000474665 NDUFA3O95167 84 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 NDUFA7O95182 113 aa5.53□□□□□ -1.52
LIMD1-204ENST00000474665 PRB2P02812 416 aaPredicted RBP5.53□□□□□ -1.52
LIMD1-204ENST00000474665 CRYGBP07316 175 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms