RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 OR1A1Q9P1Q5 309 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 KIAA1456Q9P272 454 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 GNG12Q9UBI6 72 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM96BQ9Y3D0 163 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 DMDP11532 3685 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 DOCK10Q96BY6 2186 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 AHCTF1Q8WYP5 2266 aa4.92□□□□□ -1.62
ATPAF1-204ENST00000474020 IGHV1-18A0A0C4DH31 117 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 NKX6-3A6NJ46 265 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM74A7A6NL05 159 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 LRRC30A6NM36 301 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 CEBPZOSA8MTT3 80 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 C1orf196B1AJZ1 125 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 C12orf77C9JDV5 145 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 ATP6V1G2-DDX39BF2Z307 99 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 C17orf112F2Z3M2 114 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 K7N7A8 449 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 MGST3O14880 152 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNHIT1O43257 154 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 TXNL1O43396 289 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 CST7O76096 145 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 CLDN14O95500 239 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 CLDN1O95832 211 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 HBZP02008 142 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 OR8U8P0C7N1 319 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 PRDX2P32119 198 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 GLRXP35754 106 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 GPR12P47775 334 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 RAB7AP51149 207 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF83P51522 516 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 SERF2P84101 59 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 HTD2P86397 168 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 PAX5Q02548 391 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 COL10A1Q03692 680 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 EDDM3AQ14507 147 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM74A3Q4VXF1 159 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 AKIRIN2Q53H80 203 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 CT83Q5H943 113 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 PRAMEF6Q5VXH4 476 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 CLEC9AQ6UXN8 241 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 WDR82Q6UXN9 313 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 RBMS3Q6XE24 437 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 DRAM1Q8N682 238 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 GCSAMQ8N6F7 178 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 STARD4Q96DR4 205 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 SNX22Q96L94 193 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 TOLLIPQ9H0E2 274 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 PARP12Q9H0J9 701 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 SH3BGRL3Q9H299 93 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 RPS10P5Q9NQ39 176 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 BIN3Q9NQY0 253 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 KCNIP2Q9NS61 270 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 JPT1Q9UK76 154 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 PRELID1Q9Y255 219 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 PRELID3BQ9Y3B1 194 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 FBXO7Q9Y3I1 522 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 SLC25A15Q9Y619 301 aa4.91□□□□□ -1.62
ATPAF1-204ENST00000474020 TRGV10A0A0A0MS01 117 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TRAV1-1A0A0B4J248 108 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 IGHV3-64DA0A0J9YX35 117 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ODAMA1E959 279 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 RBFOX3A6NFN3 312 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 FAM90A9PA6NNJ1 464 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 H0YL77 283 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 RAB29O14966 203 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 MLNRO43193 412 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 KLK10O43240 276 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TNFSF13O75888 250 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 NXPH3O95157 252 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 IGHV3-13P01766 116 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 HSPB1P04792 205 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 S100A6P06703 90 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 SNRNP70P08621 437 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 IAPPP10997 89 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 CTRB1P17538 263 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 PAX6P26367 422 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 CFHR2P36980 270 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ASCL1P50553 236 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 LGALS4P56470 323 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 UBE2KP61086 200 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 RBPJQ06330 500 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TNFRSF9Q07011 255 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 AESQ08117 197 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 SLC38A11Q08AI6 406 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM267Q0VDI3 215 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TCF15Q12870 199 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 Q3ZCU0 254 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM41BQ5BJD5 291 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 SPANXN5Q5MJ07 72 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 CTRB2Q6GPI1 263 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM88Q6PEY1 159 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ATRAIDQ6UW56 229 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 TMEM108Q6UXF1 575 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 Q6ZS92 163 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 MYPOPQ86VE0 399 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 THNSL2Q86YJ6 484 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 OR10P1Q8NGE3 313 aa4.9□□□□□ -1.63
ATPAF1-204ENST00000474020 OR4A16Q8NH70 328 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms