RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NDUFB6O95139 128 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SIX6O95475 246 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MPC2O95563 127 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ECDO95905 644 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 IGHG3P01860 377 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 HLA-HP01893 362 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 C1QBP02746 253 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CD3DP04234 171 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TCRBP04435 133 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CSN2P05814 226 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CD2P06729 351 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SFTPBP07988 381 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 HCKP08631 526 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GSTT2P0CG29 244 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GSTT2BP0CG30 244 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 AKAIN1P0CW23 69 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF35P13682 527 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GTF2F2P13984 249 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 HIST1H1DP16402 221 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF14P17017 642 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF24P17028 368 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CXCL2P19875 107 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RAB3AP20336 220 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 COX5AP20674 150 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SERPINA2P20848 420 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CNR1P21554 472 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 IGHV1-2P23083 117 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 STOMP27105 288 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 HLA-DMAP28067 261 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 FCGR2BP31994 310 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 FCGR2CP31995 323 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 HRH1P35367 487 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF93P35789 620 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TALDO1P37837 337 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ALDH3B1P43353 468 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR3A3P47888 321 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 NPBWR2P48146 333 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 INPP1P49441 399 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 NOVA1P51513 510 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TDGF1P3P51864 188 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SNU13P55769 128 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RAG2P55895 527 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 H2BFSP57053 126 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CARD18P57730 90 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ERVS71-1P61550 626 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RPS27AP62979 156 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GRB2P62993 217 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SUPT4H1P63272 117 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ARG2P78540 354 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MRPS10P82664 201 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 FAM3AP98173 230 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GALK2Q01415 458 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PLGLB1Q02325 96 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SRYQ05066 204 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SCRN3Q0VDG4 424 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 BAMBIQ13145 260 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PPP1R1AQ13522 171 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GK2Q14410 553 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CDK10Q15131 360 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PPA1Q15181 289 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR8B8Q15620 311 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 KISS1Q15726 138 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SGCAQ16586 387 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MICBQ29980 383 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 DEFB109BQ30KR1 87 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ALKBH6Q3KRA9 238 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PIGYQ3MUY2 71 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ACSF3Q4G176 576 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SPRNQ5BIV9 151 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PABPC1L2AQ5JQF8 200 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 LY6G6FQ5SQ64 297 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 VAX1Q5SQQ9 334 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MUC21Q5SSG8 566 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SPATA46Q5T0L3 261 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RIPPLY2Q5TAB7 128 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 FAM27BQ5VT28 67 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 AADACL3Q5VUY0 350 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 HACD4Q5VWC8 232 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PLCXD3Q63HM9 321 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GLT8D1Q68CQ7 371 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM42Q69YG0 159 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF660Q6AZW8 331 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RTL6Q6ICC9 239 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SLC25A25Q6KCM7 469 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 STEAP1BQ6NZ63 245 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PLET1Q6UQ28 207 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GLIPR1L1Q6UWM5 242 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TFAP2EQ6VUC0 442 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ASCL4Q6XD76 172 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 NCCRP1Q6ZVX7 275 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 AAED1Q7RTV5 226 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SLC16A14Q7RTX9 510 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SLC36A1Q7Z2H8 476 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR2W3Q7Z3T1 314 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 HDDC2Q7Z4H3 204 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TRAPPC6BQ86SZ2 158 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MDP1Q86V88 176 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 LHFPL1Q86WI0 220 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CALHM1Q8IU99 346 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 EGFL6Q8IUX8 553 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms