RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 CD24P25063 80 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 BTN3A2P78410 334 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 HPCAP84074 193 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 FABP5Q01469 135 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 AMTNQ6UX39 209 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 OR11H2Q8NH07 326 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 DCANP1Q8TF63 244 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 DNAJB3Q8WWF6 145 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 MS4A6AQ9H2W1 248 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 NDUFB11Q9NX14 153 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 HDGFL3Q9Y3E1 203 aa1.39□□□□□ -2.19
PTCD3-209ENST00000472044 SIPA1L1O43166 1804 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 IGLV3-9A0A075B6K5 115 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 A0A0G2JQZ4 141 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 C11orf86A6NJI1 115 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 M0R381 172 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 BIRC5O15392 142 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 YEATS4O95619 227 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 MT-CO2P00403 227 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 IGHV1-69P01742 117 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 CXCL3P19876 107 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 XCL1P47992 114 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 SERPINB10P48595 397 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 RPS24P62847 133 aaKnown RBP1.38□□□□□ -2.19
PTCD3-209ENST00000472044 GLT6D1Q7Z4J2 308 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 C1orf174Q8IYL3 243 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 SLC35F6Q8N357 371 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 CNEP1R1Q8N9A8 125 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 OR4X1Q8NH49 305 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 CLDND2Q8NHS1 167 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 MRPS24Q96EL2 167 aaKnown RBP1.38□□□□□ -2.19
PTCD3-209ENST00000472044 DHRS9Q9BPW9 319 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 MIEN1Q9BRT3 115 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 TIPINQ9BVW5 301 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 NSRP1Q9H0G5 558 aaKnown RBP1.38□□□□□ -2.19
PTCD3-209ENST00000472044 SLC2A9Q9NRM0 540 aa1.38□□□□□ -2.19
PTCD3-209ENST00000472044 PCYT1BQ9Y5K3 369 aaPredicted RBP1.38□□□□□ -2.19
PTCD3-209ENST00000472044 PTPRSQ13332 1948 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 C2orf74A8MZ97 194 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 IL6P05231 212 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 ZNF728P0DKX0 622 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 CXCL2P19875 107 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 ALOX5APP20292 161 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 IFNGR2P38484 337 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 RBM11P57052 281 aaKnown RBP1.37□□□□□ -2.19
PTCD3-209ENST00000472044 MAP3K7CLP57077 242 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 MED21Q13503 144 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 GNA13Q14344 377 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 TPRXLQ17RH7 258 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 LGALS9BQ3B8N2 356 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 KRTAP21-3Q3LHN1 58 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 AGTRAPQ6RW13 159 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 BAP18Q8IXM2 172 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 LRRC34Q8IZ02 419 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 FAM9CQ8IZT9 166 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 Q8N402 240 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 OR52B2Q96RD2 323 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 UPF3BQ9BZI7 483 aaKnown RBP1.37□□□□□ -2.19
PTCD3-209ENST00000472044 PLEKHJ1Q9NW61 149 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 RTEL1-TNFRSF6BF6WH68 1400 aa1.37□□□□□ -2.19
PTCD3-209ENST00000472044 PTPRBP23467 1997 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 C5orf49A4QMS7 147 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 OR6C6A6NF89 314 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 F5H768 121 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 UBE2L6O14933 153 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 CD40LGP29965 261 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 TMEM33P57088 247 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 CXCR4P61073 352 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 HLA-DRB3P79483 266 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 HOXC5Q00444 222 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 ZNF90Q03938 601 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 TMEM31Q5JXX7 168 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 TMEM251Q8N6I4 163 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 RPS4Y2Q8TD47 263 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 SMCR5Q8TEV8 140 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 FGF13Q92913 245 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 SLC35G5Q96KT7 338 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 KCTD7Q96MP8 289 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 HDHD2Q9H0R4 259 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 HES4Q9HCC6 221 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 NUMA1Q14980 2115 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 KIAA2026Q5HYC2 2103 aa1.36□□□□□ -2.19
PTCD3-209ENST00000472044 FN1P02751 2386 aaKnown RBP1.35□□□□□ -2.19
PTCD3-209ENST00000472044 C1orf232A0A0U1RR37 186 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 ARRDC5A6NEK1 342 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 GOLGA8KD6RF30 607 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 GOLGA8MH3BSY2 632 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 COCHO43405 550 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 NPYP01303 97 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 UGT2B7P16662 529 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 DDTP30046 118 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 EMP2P54851 167 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 TAS2R30P59541 319 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 DMTNQ08495 405 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 PRDX4Q13162 271 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 PLPPR5Q32ZL2 321 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 PABPC1L2AQ5JQF8 200 aa1.35□□□□□ -2.19
PTCD3-209ENST00000472044 N4BP2L1Q5TBK1 243 aaPredicted RBP1.35□□□□□ -2.19
PTCD3-209ENST00000472044 Q6ZTI0 123 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms