RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 OR2D3Q8NGH3 330 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 CCL13Q99616 98 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 TRAV14DV4A0A0A6YYC5 116 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 SPAARA0A1B0GVQ0 90 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 RNF222A6NCQ9 220 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 CBY3A6NI87 242 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 MARCH11A6NNE9 402 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 FAM157AC9JC47 383 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 KLF14Q8TD94 323 aaPredicted RBP11.1□□□□□ -0.63
PCCB-210ENST00000471595 PCGF1Q9BSM1 259 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 CALYQ9NYX4 217 aa11.1□□□□□ -0.63
PCCB-210ENST00000471595 CDK2AP1O14519 115 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 TBX15Q96SF7 602 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 ZSWIM8A7E2V4 1837 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 TGIF2-C20orf24A0A0A6YYL0 155 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 RAMP1O60894 148 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 CDX1P47902 265 aaPredicted RBP11.09□□□□□ -0.63
PCCB-210ENST00000471595 HSPE1P61604 102 aaKnown RBP11.09□□□□□ -0.63
PCCB-210ENST00000471595 PPP1R32Q7Z5V6 425 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 SFXN3Q9BWM7 321 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 IFNL4K9M1U5 179 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 SLC35E4Q6ICL7 350 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 ZNF441Q8N8Z8 693 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 ITLN1Q8WWA0 313 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 TMEM140Q9NV12 185 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 IDI2-AS1Q9NZ38 188 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 PQLC2LA1A4F0 135 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 A8MWL6 223 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 DIRC3C9JPN6 131 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 BMPR1BO00238 502 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 CDCP2Q5VXM1 449 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 GBGT1Q8N5D6 347 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 VN1R17PQ8TDU5 208 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 FAM216AQ8WUB2 273 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 MSGN1A6NI15 193 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 MPZP25189 248 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 RPL27AP46776 148 aaKnown RBP11.09□□□□□ -0.63
PCCB-210ENST00000471595 OR8I2Q8N0Y5 310 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 WASHC3Q9Y3C0 194 aa11.09□□□□□ -0.63
PCCB-210ENST00000471595 RPL8P62917 257 aaKnown RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 DRAM1Q8N682 238 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 MEGF10Q96KG7 1140 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 ZG16O60844 167 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 GPHA2Q96T91 129 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 C19orf24Q9BVV8 132 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 S1PR2O95136 353 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 CD99P14209 185 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 MDKP21741 143 aaPredicted RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 CEBPDP49716 269 aaPredicted RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 IBA57Q5T440 356 aaKnown RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 MIC13Q5XKP0 118 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 SLC25A28Q96A46 364 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 METTL1Q9UBP6 276 aaKnown RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 KBTBD11O94819 623 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 HLA-DQA1P01909 254 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 PRSS1P07477 247 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 REG1BP48304 166 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 MFAP2P55001 183 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 ATP5IP56385 69 aaPredicted RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 ERVFRD-1P60508 538 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 RPL30P62888 115 aaKnown RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 SNRNP40Q96DI7 357 aaKnown RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 NAGKQ9UJ70 344 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 IGLV3-12A0A075B6K2 115 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 TMEM250H0YL14 139 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 F2RL2O00254 374 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 LINC00869P0C866 280 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 FHITP49789 147 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 MMDQ15546 238 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 MRPL13Q9BYD1 178 aaKnown RBP11.08□□□□□ -0.64
PCCB-210ENST00000471595 CDC42EP3Q9UKI2 254 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
PCCB-210ENST00000471595 UCP1P25874 307 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 CCL8P80075 99 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 ZNF788Q6ZQV5 615 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 TET1Q8NFU7 2136 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 CALHM1Q8IU99 346 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 TMEM116Q8NCL8 245 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 FAM222BQ8WU58 562 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 ZNF430Q9H8G1 570 aaPredicted RBP11.07□□□□□ -0.64
PCCB-210ENST00000471595 EIF3GO75821 320 aaKnown RBP eCLIP11.07□□□□□ -0.64
PCCB-210ENST00000471595 MMD2Q8IY49 270 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 C1QTNF5Q9BXJ0 243 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 ZNHIT1O43257 154 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 ORM1P02763 201 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 AGAP20933 346 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 LYRM7Q5U5X0 104 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 OR5R1Q8NH85 324 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 SCNM1Q9BWG6 230 aa11.07□□□□□ -0.64
PCCB-210ENST00000471595 ZIC3O60481 467 aa11.06□□□□□ -0.64
PCCB-210ENST00000471595 CCL1P22362 96 aa11.06□□□□□ -0.64
PCCB-210ENST00000471595 PPOXP50336 477 aa11.06□□□□□ -0.64
PCCB-210ENST00000471595 F5H697 171 aa11.06□□□□□ -0.64
PCCB-210ENST00000471595 NDUFA2O43678 99 aa11.06□□□□□ -0.64
PCCB-210ENST00000471595 COMPP49747 757 aaPredicted RBP11.06□□□□□ -0.64
PCCB-210ENST00000471595 Q1RN00 199 aa11.06□□□□□ -0.64
PCCB-210ENST00000471595 SPSB4Q96A44 273 aa11.06□□□□□ -0.64
PCCB-210ENST00000471595 MRPS18CQ9Y3D5 142 aaKnown RBP11.06□□□□□ -0.64
PCCB-210ENST00000471595 A0A1W2PRD5 423 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms