RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 GPR82Q96P67 336 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 ANAPC13Q9BS18 74 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 TMEM243Q9BU79 118 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 C20orf27Q9GZN8 174 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 CHST6Q9GZX3 395 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 OR52D1Q9H346 318 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 DAZ1Q9NQZ3 744 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 DAZ3Q9NR90 486 aaKnown RBP3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 FAM49BQ9NUQ9 324 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 POMPQ9Y244 141 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 PXMP4Q9Y6I8 212 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 U3KQ87 197 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 A2MP01023 1474 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 OVOS2A0A0J9YW53 1432 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 NPATQ14207 1427 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 OVOS2Q6IE36 1432 aa3.26□□□□□ -1.89
PRPF40A-206ENST00000471167 TONSLQ96HA7 1378 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 MYH10P35580 1976 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 hCG_1818297A0A087WSY0 165 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 MEIKINA0A087WXM9 373 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 IGHV6-1A0A0B4J1U7 121 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 FAM92AA1XBS5 289 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 EPOPA6NHQ4 379 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 A8MT66 165 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 UPK1AO00322 258 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 RGS5O15539 181 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 METTL15P1P0C7V9 234 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 OR12D1P0DN82 309 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 RPL7P18124 248 aaKnown RBP3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 BLVRBP30043 206 aaPredicted RBP3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 MP68P56378 58 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 BTN1A1Q13410 526 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 C12orf74Q32Q52 190 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 ABCA11PQ4W5N1 156 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 UBE2NLQ5JXB2 153 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 DNAJC24Q6P3W2 148 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 ARL9Q6T311 187 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 SBSNQ6UWP8 590 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 FAM19A3Q7Z5A8 133 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 ZNF615Q8N8J6 731 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 ZIC4Q8N9L1 334 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 LY6G5BQ8NDX9 201 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 OR1L1Q8NH94 360 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 LINC01006Q8NI28 216 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 TWIST2Q8WVJ9 160 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 DCUN1D4Q92564 292 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 PLEKHB2Q96CS7 222 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 MALSU1Q96EH3 234 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 OR2M2Q96R28 347 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 SLCO1B3Q9NPD5 702 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 CCL28Q9NRJ3 127 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 PCYT1BQ9Y5K3 369 aaPredicted RBP3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 PLCH2O75038 1416 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 PPIP5K1Q6PFW1 1433 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 MYH2Q9UKX2 1941 aa3.25□□□□□ -1.89
PRPF40A-206ENST00000471167 FAM135AQ9P2D6 1515 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 YLPM1P49750 1951 aaKnown RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 IGKV1-27A0A075B6S5 117 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 TRAV8-1A0A0A6YYK1 113 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 C5orf63A6NC05 138 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 GYG2O15488 501 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 ANGPTL7O43827 346 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 PIAS1O75925 651 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 C8GP07360 202 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 RPS3P23396 243 aaKnown RBP eCLIP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 COX7A1P24310 79 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 POLR2IP36954 125 aaKnown RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 WNT4P56705 351 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 DEFA3P59666 94 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 GRB2P62993 217 aaKnown RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 MEF2CQ06413 473 aaPredicted RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 ERCC8Q13216 396 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 LRRC10Q5BKY1 277 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 TNFAIP8L3Q5GJ75 292 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 COA6Q5JTJ3 125 aaKnown RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 CLLU1OSQ5K130 101 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 IBA57Q5T440 356 aaKnown RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 Q6ZSR6 202 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 RFLNAQ6ZTI6 216 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 PRNTQ86SH4 94 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 TMEM86AQ8N2M4 240 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 SLC30A7Q8NEW0 376 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 OR5A1Q8NGJ0 315 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 ACOT12Q8WYK0 555 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 RPUSD4Q96CM3 377 aaKnown RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 TSPAN32Q96QS1 320 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 ZNF649Q9BS31 505 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 SLC25A2Q9BXI2 301 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 YIPF3Q9GZM5 350 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 VCXQ9H320 206 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 CDC42EP4Q9H3Q1 356 aaKnown RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 POPDC3Q9HBV1 291 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 PARP11Q9NR21 331 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 SLC23A2Q9UGH3 650 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 LINC00527Q9UJ94 153 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 KLF13Q9Y2Y9 288 aaPredicted RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 F11RQ9Y624 299 aaKnown RBP3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 HECW2Q9P2P5 1572 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 ABCC12Q96J65 1359 aa3.24□□□□□ -1.89
PRPF40A-206ENST00000471167 BAZ2AQ9UIF9 1905 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms