RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ANKRD55Q3KP44 614 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 MIDNQ504T8 468 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 THOC7Q6I9Y2 204 aaKnown RBP7.95□□□□□ -1.14
CCM2-204ENST00000470837 GSG1LQ6UXU4 331 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 ZNF833PQ6ZTB9 187 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 MOB3BQ86TA1 216 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 DRAXINQ8NBI3 349 aaPredicted RBP7.95□□□□□ -1.14
CCM2-204ENST00000470837 GLYATL2Q8WU03 294 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 ASB13Q8WXK3 278 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 RBPMSQ93062 196 aaKnown RBP7.95□□□□□ -1.14
CCM2-204ENST00000470837 MSI2Q96DH6 328 aaKnown RBP7.95□□□□□ -1.14
CCM2-204ENST00000470837 GPHA2Q96T91 129 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 SPIN2AQ99865 258 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 SPIN2BQ9BPZ2 258 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 SLC35D1Q9NTN3 355 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 TMED3Q9Y3Q3 217 aa7.95□□□□□ -1.14
CCM2-204ENST00000470837 TBL2Q9Y4P3 447 aaKnown RBP7.95□□□□□ -1.14
CCM2-204ENST00000470837 POLQO75417 2590 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 ANKRD17O75179 2603 aaKnown RBP7.94□□□□□ -1.14
CCM2-204ENST00000470837 A0A096LNT2 108 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 RNASEK-C17orf49H0YIS7 233 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 RBFOX2O43251 390 aaKnown RBP eCLIP7.94□□□□□ -1.14
CCM2-204ENST00000470837 CDS2O95674 445 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 HPRT1P00492 218 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 HOXB5P09067 269 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 SULT1A3P0DMM9 295 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 SULT1A4P0DMN0 295 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 IGHV4-31P0DP07 118 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 MMP9P14780 707 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 LPAR6P43657 344 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 DLX1P56177 255 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 CYCSP99999 105 aaKnown RBP7.94□□□□□ -1.14
CCM2-204ENST00000470837 CD83Q01151 205 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 ZNF816Q0VGE8 651 aaPredicted RBP7.94□□□□□ -1.14
CCM2-204ENST00000470837 UTF1Q5T230 341 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 DHRS7BQ6IAN0 325 aaPredicted RBP7.94□□□□□ -1.14
CCM2-204ENST00000470837 ODF3L1Q8IXM7 274 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 LRTM2Q8N967 370 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 OR4P4Q8NGL7 312 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 TMEM56Q96MV1 263 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 TBX15Q96SF7 602 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 MRPL20Q9BYC9 149 aaKnown RBP7.94□□□□□ -1.14
CCM2-204ENST00000470837 PRR13Q9NZ81 148 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 COMMD9Q9P000 198 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 ZNRD1Q9P1U0 126 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 FAM96BQ9Y3D0 163 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 HILPDAQ9Y5L2 63 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 TMEM56-RWDD3S4R434 201 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 KIAA2026Q5HYC2 2103 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 UNC79Q9P2D8 2635 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 HECTD1Q9ULT8 2610 aa7.94□□□□□ -1.14
CCM2-204ENST00000470837 TRAV40A0A0B4J280 105 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 IGHV1-69DA0A0B4J2H0 117 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 LINC00473A8K010 186 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 ODF3BA8MYP8 253 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 NPFFO15130 113 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 RBMXL2O75526 392 aaKnown RBP7.93□□□□□ -1.14
CCM2-204ENST00000470837 CRYZL1O95825 349 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 HRASP01112 189 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 IGHV1-69P01742 117 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 CT45A6P0DMU7 189 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 CT45A5P0DMU8 189 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 CT45A7P0DMV0 189 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 VDAC1P21796 283 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 RPL30P62888 115 aaKnown RBP7.93□□□□□ -1.14
CCM2-204ENST00000470837 EIF4EBP1Q13541 118 aaPredicted RBP7.93□□□□□ -1.14
CCM2-204ENST00000470837 TPTE2P1Q5T6R2 138 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 H2BFWTQ7Z2G1 175 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 PDPNQ86YL7 162 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 KRTAP1-3Q8IUG1 177 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 FAM219AQ8IW50 185 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 OR8H3Q8N146 312 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 SLC35G3Q8N808 338 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 DMBX1Q8NFW5 382 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 OR5M8Q8NGP6 311 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 CHAC2Q8WUX2 184 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 FLYWCH2Q96CP2 140 aaKnown RBP7.93□□□□□ -1.14
CCM2-204ENST00000470837 MALSU1Q96EH3 234 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 C5orf30Q96GV9 206 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 ZNF251Q9BRH9 671 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 CHIAQ9BZP6 476 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 ZNF436Q9C0F3 470 aaPredicted RBP7.93□□□□□ -1.14
CCM2-204ENST00000470837 PLEKHA2Q9HB19 425 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 WASHC3Q9Y3C0 194 aa7.93□□□□□ -1.14
CCM2-204ENST00000470837 APCP25054 2843 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 IGHV1-3A0A0C4DH29 117 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 CENPVL3A0A0U1RRI6 287 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 SHOXO15266 292 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 ADAP1O75689 374 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 S1PR2O95136 353 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 KRASP01116 189 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 GIPP09681 153 aaPredicted RBP7.92□□□□□ -1.14
CCM2-204ENST00000470837 NQO2P16083 231 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 BRS3P32247 399 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 BPIFB3P59826 476 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 RAP2BP61225 183 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 RPS16P62249 146 aaKnown RBP7.92□□□□□ -1.14
CCM2-204ENST00000470837 FGL1Q08830 312 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 SSX2Q16385 188 aa7.92□□□□□ -1.14
CCM2-204ENST00000470837 IAH1Q2TAA2 248 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms