RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 MICU1Q9BPX6 476 aa7.12□□□□□ -1.27
SYNGAP1-205ENST00000470232 C12orf4Q9NQ89 552 aa7.12□□□□□ -1.27
SYNGAP1-205ENST00000470232 GAR1Q9NY12 217 aaKnown RBP7.12□□□□□ -1.27
SYNGAP1-205ENST00000470232 KCNK7Q9Y2U2 307 aa7.12□□□□□ -1.27
SYNGAP1-205ENST00000470232 HYDINQ4G0P3 5121 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 A0A0B4J2A0 478 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 RNF222A6NCQ9 220 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 TMEM210A6NLX4 147 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 MFNGO00587 321 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 BET1O15155 118 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 ARG1P05089 322 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 PGAM2P15259 253 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 PSMB6P28072 239 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 THBS3P49746 956 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 TAS2R46P59540 309 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 SSX2Q16385 188 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 TMEM95Q3KNT9 176 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 SNAI3Q3KNW1 292 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 TCTEX1D4Q5JR98 221 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 Q6ZS46 218 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 LHFPL4Q7Z7J7 247 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 CALHM1Q8IU99 346 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 ARRDC1Q8N5I2 433 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 TMEM104Q8NE00 496 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 CCDC54Q8NEL0 328 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 CSNK2A3Q8NEV1 391 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 TMEM185AQ8NFB2 350 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 MRGPRFQ96AM1 343 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 PHYHIPLQ96FC7 376 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 RCHY1Q96PM5 261 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 RTL8AQ9BWD3 113 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 TLNRD1Q9H1K6 362 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 OR10A2Q9H208 303 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 ZMAT4Q9H898 229 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 CHMP1AQ9HD42 196 aaPredicted RBP7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 PNRC2Q9NPJ4 139 aaKnown RBP7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 ZC4H2Q9NQZ6 224 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 SHPKQ9UHJ6 478 aa7.11□□□□□ -1.27
SYNGAP1-205ENST00000470232 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 APOC3P02656 99 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 TPT1P13693 172 aaKnown RBP7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 GLRA1P23415 457 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 RPL31P62899 125 aaKnown RBP7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 ZNF273Q14593 569 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 PLAC9Q5JTB6 97 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 ELP2Q6IA86 826 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 MOB3CQ70IA8 216 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 STPG2Q8N412 459 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 ZNRF1Q8ND25 227 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 BPIFCQ8NFQ6 507 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 TERB2Q8NHR7 220 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 LHFPL5Q8TAF8 219 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 ARHGAP5-AS1Q96IT6 56 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 S100A13Q99584 98 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 PECRQ9BY49 303 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 NMES1Q9C002 83 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 WDR13Q9H1Z4 485 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 ELL3Q9HB65 397 aaPredicted RBP7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 ZFP57Q9NU63 452 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 TAS2R3Q9NYW6 316 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 ZNF319Q9P2F9 582 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 GHRLQ9UBU3 117 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 GPR132Q9UNW8 380 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 MPC1Q9Y5U8 109 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 V9GYS6 101 aa7.1□□□□□ -1.27
SYNGAP1-205ENST00000470232 TEX13DA0A0J9YY54 714 aaPredicted RBP7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 A0A1W2PP11 408 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 NUDT19A8MXV4 375 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 JTBO76095 146 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 APOC1P02654 83 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 TMEM50BP56557 158 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 DEFA5Q01523 94 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 ARL6IP1Q15041 203 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 C9orf66Q5T8R8 295 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 TMEM200BQ69YZ2 307 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 WDR86Q86TI4 376 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 DYNAPQ8N1N2 210 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 SPSB4Q96A44 273 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 TMEM230Q96A57 120 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 LYZL4Q96KX0 146 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 HIST1H2AAQ96QV6 131 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 PRR25Q96S07 402 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 ST6GALNAC5Q9BVH7 336 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 PAPOLGQ9BWT3 736 aaKnown RBP7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 EHFQ9NZC4 300 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 C14orf166Q9Y224 244 aaKnown RBP7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 SMAD5-AS1Q9Y6J3 95 aa7.09□□□□□ -1.27
SYNGAP1-205ENST00000470232 IGKV1-9A0A0C4DH69 117 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 A0A0U1RQV5 110 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 RAB19A4D1S5 217 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 DBX1A6NMT0 343 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 F8VVB4 439 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 F8VWA3 439 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 SDCBPO00560 298 aaPredicted RBP7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 FGF16O43320 207 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 CA11O75493 328 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 MTRF1O75570 445 aaKnown RBP7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 DHRS3O75911 302 aa7.08□□□□□ -1.28
SYNGAP1-205ENST00000470232 HTR3BO95264 441 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms