RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 H3BUA1 57 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 M0R1X1 148 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 DENRO43583 198 aaKnown RBP13.45□□□□□ -0.26
COL7A1-208ENST00000470076 RGS10O43665 173 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 SLC25A17O43808 307 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 FRMD6-AS1P0C7T7 363 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 CALRP27797 417 aaKnown RBP13.45□□□□□ -0.26
COL7A1-208ENST00000470076 CLDN12P56749 244 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 LINC00205P59089 165 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 MRPS15P82914 257 aaKnown RBP13.45□□□□□ -0.26
COL7A1-208ENST00000470076 C2orf76Q3KRA6 126 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 PLAC9Q5JTB6 97 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 OVCH2Q7RTZ1 564 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 GRPEL2Q8TAA5 225 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 ELOVL1Q9BW60 279 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 SLC35D1Q9NTN3 355 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 V9GY05 133 aa13.45□□□□□ -0.26
COL7A1-208ENST00000470076 LDLRAD4O15165 306 aa13.44□□□□□ -0.26
COL7A1-208ENST00000470076 CD3GP09693 182 aa13.44□□□□□ -0.26
COL7A1-208ENST00000470076 SNRPBP14678 240 aaKnown RBP13.44□□□□□ -0.26
COL7A1-208ENST00000470076 LGALS7P47929 136 aa13.44□□□□□ -0.26
COL7A1-208ENST00000470076 POC5Q8NA72 575 aa13.44□□□□□ -0.26
COL7A1-208ENST00000470076 RANGRFQ9HD47 186 aaPredicted RBP13.44□□□□□ -0.26
COL7A1-208ENST00000470076 ACOT13Q9NPJ3 140 aa13.44□□□□□ -0.26
COL7A1-208ENST00000470076 ZNF355PQ9NSJ1 428 aa13.44□□□□□ -0.26
COL7A1-208ENST00000470076 STUB1Q9UNE7 303 aa13.44□□□□□ -0.26
COL7A1-208ENST00000470076 A0A0G2JLM5 398 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 C13orf42A0A1B0GVH6 325 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 ERICH4A6NGS2 130 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 TRIM64CA6NLI5 447 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 FABP7O15540 132 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 CNIH1O95406 144 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 DIRAS3O95661 229 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 ZP3P21754 424 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 AQP4P55087 323 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 FABP5Q01469 135 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 TAGLNQ01995 201 aaKnown RBP13.43□□□□□ -0.26
COL7A1-208ENST00000470076 MOGAT2Q3SYC2 334 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 PRSS48Q7RTY5 328 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 MUC7Q8TAX7 377 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 RAB3CQ96E17 227 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 TMEM68Q96MH6 324 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 MGLLQ99685 303 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 CCDC90BQ9GZT6 254 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 ZMAT4Q9H898 229 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 NKX1-2Q9UD57 310 aaPredicted RBP13.43□□□□□ -0.26
COL7A1-208ENST00000470076 RAB22AQ9UL26 194 aa13.43□□□□□ -0.26
COL7A1-208ENST00000470076 TMEM272A0A1B0GTI8 110 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 BET1O15155 118 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 IGLV1-51P01701 117 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 IGLV2-23P01705 113 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 SSBP2P81877 361 aaPredicted RBP13.42□□□□□ -0.26
COL7A1-208ENST00000470076 CBX3Q13185 183 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 OR5T1Q8NG75 326 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 OR10J5Q8NHC4 309 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 CABLES2Q9BTV7 478 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 OR2D2Q9H210 308 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 KCNK7Q9Y2U2 307 aa13.42□□□□□ -0.26
COL7A1-208ENST00000470076 TRBV6-7A0A0A0MS04 114 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 BRI3O95415 125 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 CRYGBP07316 175 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 FCGR3AP08637 254 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 CRHBPP24387 322 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 PJVKQ0ZLH3 352 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 SRSF7Q16629 238 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL7A1-208ENST00000470076 IGSF11Q5DX21 431 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 HES5Q5TA89 166 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 ANKRD13BQ86YJ7 626 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 NRG4Q8WWG1 115 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 HARBI1Q96MB7 349 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 RSRP1Q9BUV0 290 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 SDHAF2Q9NX18 166 aa13.41□□□□□ -0.26
COL7A1-208ENST00000470076 ANKRD65E5RJM6 399 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 PDCD5O14737 125 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 AADACP22760 399 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 GADD45AP24522 165 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 PLA2G7Q13093 441 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 RTL8BQ17RB0 113 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 TMEM177Q53S58 311 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 CASC10Q5T4H9 136 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 OR10R2Q8NGX6 335 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 CENPOQ9BU64 300 aa13.4□□□□□ -0.26
COL7A1-208ENST00000470076 TNCP24821 2201 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 TRAV1-2A0A0B4J238 106 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 SHOXO15266 292 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 GSTT2P0CG29 244 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 GSTT2BP0CG30 244 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 RRASP10301 218 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 MAP2K4P45985 399 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 KLF5Q13887 457 aaPredicted RBP13.39□□□□□ -0.27
COL7A1-208ENST00000470076 HAPLN4Q86UW8 402 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 Q8N1Y9 231 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 BVESQ8NE79 360 aa13.39□□□□□ -0.27
COL7A1-208ENST00000470076 TINAGL1Q9GZM7 467 aaPredicted RBP13.39□□□□□ -0.27
COL7A1-208ENST00000470076 RBM7Q9Y580 266 aaKnown RBP13.39□□□□□ -0.27
COL7A1-208ENST00000470076 ANKRD34BA5PLL1 514 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 A8MZ25 164 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 MFNGO00587 321 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 IGHV4-30-4P0DP06 118 aa13.38□□□□□ -0.27
COL7A1-208ENST00000470076 HIST1H1DP16402 221 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms