RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 GPR61Q9BZJ8 451 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 OBP2BQ9NPH6 170 aa11.41□□□□□ -0.58
BRCA1-209ENST00000470026 FGF7P21781 194 aa11.4□□□□□ -0.58
BRCA1-209ENST00000470026 TNFSF10P50591 281 aa11.4□□□□□ -0.58
BRCA1-209ENST00000470026 ATP1A1-AS1Q5TC04 95 aa11.4□□□□□ -0.58
BRCA1-209ENST00000470026 TGIF2LYQ8IUE0 185 aa11.4□□□□□ -0.58
BRCA1-209ENST00000470026 OR10G9Q8NGN4 311 aa11.4□□□□□ -0.58
BRCA1-209ENST00000470026 OR10G7Q8NGN6 311 aa11.4□□□□□ -0.58
BRCA1-209ENST00000470026 OR10D4PQ8NGN7 298 aa11.4□□□□□ -0.58
BRCA1-209ENST00000470026 HSD17B10Q99714 261 aaKnown RBP11.4□□□□□ -0.58
BRCA1-209ENST00000470026 NPCDR1Q9BY65 106 aa11.4□□□□□ -0.58
BRCA1-209ENST00000470026 ACTR3CQ9C0K3 210 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-209ENST00000470026 ZMAT5Q9UDW3 170 aaKnown RBP11.4□□□□□ -0.58
BRCA1-209ENST00000470026 USF3Q68DE3 2245 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 OR5H1A6NKK0 313 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 LINC00473A8K010 186 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 C15orf65H3BRN8 121 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 HTD2P86397 168 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 BSXQ3C1V8 233 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 HES3Q5TGS1 186 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 CDPF1Q6NVV7 123 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 DHRS13Q6UX07 377 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 OR10A7Q8NGE5 316 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 OR51G1Q8NGK1 321 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 MRGPRDQ8TDS7 321 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 FAM216AQ8WUB2 273 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 NINJ1Q92982 152 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 SLC25A22Q9H936 323 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 HIST1H1BP16401 226 aaKnown RBP11.39□□□□□ -0.59
BRCA1-209ENST00000470026 PLA2G5P39877 138 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 TFF3Q07654 80 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 FFAR4Q5NUL3 377 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 H2BFWTQ7Z2G1 175 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 C16orf82Q7Z2V1 217 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 OR13A1Q8NGR1 328 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 OR4X1Q8NH49 305 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 PARLQ9H300 379 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 PRDM13Q9H4Q3 707 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 PITPNC1Q9UKF7 332 aa11.39□□□□□ -0.59
BRCA1-209ENST00000470026 C15orf62A8K5M9 175 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 GATCO43716 136 aaKnown RBP11.38□□□□□ -0.59
BRCA1-209ENST00000470026 LY86O95711 162 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 GABRA2P47869 451 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 COL10A1Q03692 680 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 ADIRFQ15847 76 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 COA6Q5JTJ3 125 aaKnown RBP11.38□□□□□ -0.59
BRCA1-209ENST00000470026 TRAT1Q6PIZ9 186 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 CXorf67Q86X51 503 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-209ENST00000470026 GCNT2Q8N0V5 402 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 RAB24Q969Q5 203 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 FAM90A9PA6NNJ1 464 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 IGLV1-44P01699 117 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 ADH4P08319 380 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 SSTR5P35346 364 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 KIR2DL2P43627 348 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-209ENST00000470026 HOXA4Q00056 320 aaPredicted RBP11.38□□□□□ -0.59
BRCA1-209ENST00000470026 PMP22Q01453 160 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 SMIM21Q3B7S5 101 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 PRAMEF6Q5VXH4 476 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 BTNL3Q6UXE8 466 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 ZNF383Q8NA42 475 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 WDR83OSQ9Y284 106 aa11.38□□□□□ -0.59
BRCA1-209ENST00000470026 FAM186AA6NE01 2351 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 SMCO3A2RU48 225 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 SOX15O60248 233 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 PROP1O75360 226 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 VENTXO95231 258 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 FOXF2Q12947 444 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 MBNL2Q5VZF2 373 aaKnown RBP11.37□□□□□ -0.59
BRCA1-209ENST00000470026 TMPRSS7Q7RTY8 843 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 GATAD1Q8WUU5 269 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 RAB1CQ92928 201 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 ANAPC16Q96DE5 110 aa11.37□□□□□ -0.59
BRCA1-209ENST00000470026 TRBV23-1A0A0A0MS06 115 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 MARCH11A6NNE9 402 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 C17orf112F2Z3M2 114 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 CR1LQ2VPA4 569 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 PDLIM3Q53GG5 364 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-209ENST00000470026 CD177Q8N6Q3 437 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 RPUSD4Q96CM3 377 aaKnown RBP11.36□□□□□ -0.59
BRCA1-209ENST00000470026 NEIL1Q96FI4 390 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-209ENST00000470026 TRIB1Q96RU8 372 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 HIST1H2BLQ99880 126 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 KNTC1P50748 2209 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 H7BYZ3 331 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 HMGB3O15347 200 aaKnown RBP11.36□□□□□ -0.59
BRCA1-209ENST00000470026 AGFG2O95081 481 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 TFF1P04155 84 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 TYMSP04818 313 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 CECR9P0C854 216 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 GZMHP20718 246 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 DUTP33316 252 aaKnown RBP11.36□□□□□ -0.59
BRCA1-209ENST00000470026 ACOT6Q3I5F7 207 aaPredicted RBP11.36□□□□□ -0.59
BRCA1-209ENST00000470026 Q3ZCU0 254 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 FAM180AQ6UWF9 173 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 FAM90A1Q86YD7 464 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 TMEM183AQ8IXX5 376 aa11.36□□□□□ -0.59
BRCA1-209ENST00000470026 ZNF709Q8N972 641 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms