RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 COL5A1-AS1Q5SY13 56 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 IGFL2Q6UWQ7 119 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 TOMM20LQ6UXN7 152 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 ZNF295-AS1Q8N0V1 137 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 IL22RA2Q969J5 263 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 PARLQ9H300 379 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 CRIM1Q9NZV1 1036 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 ZNF891A8MT65 544 aaPredicted RBP11.73□□□□□ -0.53
GPC1-208ENST00000469694 CD33P20138 364 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 UCP1P25874 307 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 KRTAP27-1Q3LI81 207 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 TMEM41BQ5BJD5 291 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 CST9LP1Q5W188 147 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 GPHA2Q96T91 129 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 MSL2Q9HCI7 577 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 AURKAIP1Q9NWT8 199 aaPredicted RBP11.73□□□□□ -0.53
GPC1-208ENST00000469694 TRAV17A0A0B4J275 112 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 GCH1P30793 250 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 TFPI2P48307 235 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 RANP62826 216 aaKnown RBP11.73□□□□□ -0.53
GPC1-208ENST00000469694 OR8B8Q15620 311 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 TPTE2P1Q5T6R2 138 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 LHX4Q969G2 390 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 TRAPPC1Q9Y5R8 145 aa11.73□□□□□ -0.53
GPC1-208ENST00000469694 ZZEF1O43149 2961 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 RAB7AP51149 207 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 UBE2NP61088 152 aaKnown RBP11.72□□□□□ -0.53
GPC1-208ENST00000469694 RPP30P78346 268 aaKnown RBP11.72□□□□□ -0.53
GPC1-208ENST00000469694 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 ZNF818PQ6ZRF7 136 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 CALHM1Q8IU99 346 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 C11orf42Q8N5U0 333 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 MRPL30Q8TCC3 161 aaKnown RBP11.72□□□□□ -0.53
GPC1-208ENST00000469694 SPSB1Q96BD6 273 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 PXMP4Q9Y6I8 212 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 IL3RAP26951 378 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 FOXC1Q12948 553 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 TMEM211Q6ICI0 200 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 ALKBH2Q6NS38 261 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 ASCL4Q6XD76 172 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 GAPTQ8N292 157 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 PIGCQ92535 297 aa11.72□□□□□ -0.53
GPC1-208ENST00000469694 PINX1Q96BK5 328 aaKnown RBP11.72□□□□□ -0.53
GPC1-208ENST00000469694 hCG_38984A0A1B0GV85 526 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.53
GPC1-208ENST00000469694 GYPAP02724 150 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 TMEM183BQ1AE95 376 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 LRRC75BQ2VPJ9 315 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 Q6ZWC4 215 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 CNEP1R1Q8N9A8 125 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 RNASE8Q8TDE3 154 aaKnown RBP11.71□□□□□ -0.53
GPC1-208ENST00000469694 RAB40CQ96S21 281 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 PLK3Q9H4B4 646 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 MANBALQ9NQG1 85 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 SLC39A9Q9NUM3 307 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 PAM16Q9Y3D7 125 aa11.71□□□□□ -0.53
GPC1-208ENST00000469694 SPTBN4Q9H254 2564 aa11.71□□□□□ -0.54
GPC1-208ENST00000469694 TLE1Q04724 770 aa11.71□□□□□ -0.54
GPC1-208ENST00000469694 MYPOPQ86VE0 399 aaPredicted RBP11.71□□□□□ -0.54
GPC1-208ENST00000469694 IGKV1-12A0A0C4DH73 117 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 LYZL6O75951 148 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 IGKV1D-12P01611 117 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 IGHG3P01860 377 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 CHRNB4P30926 498 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 PSMB3P49720 205 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 ARL16Q0P5N6 197 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 FAM180AQ6UWF9 173 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 OSR2Q8N2R0 312 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 CMTM2Q8TAZ6 248 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 ST3GAL6Q9Y274 331 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 A0A0U1RQK1 487 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 ZNF320A2RRD8 509 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 PDCD6O75340 191 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 NRASP01111 189 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 TESK1Q15569 626 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 IGFBP7Q16270 282 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 FAM78BQ5VT40 261 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 OR5D13Q8NGL4 314 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 C22orf15Q8WYQ4 148 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 C1QTNF5Q9BXJ0 243 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 GAL3ST2Q9H3Q3 398 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 YLPM1P49750 1951 aaKnown RBP11.7□□□□□ -0.54
GPC1-208ENST00000469694 ARHGAP21Q5T5U3 1957 aa11.7□□□□□ -0.54
GPC1-208ENST00000469694 IGF2RP11717 2491 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 A0A0G2JRQ6 117 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 ITGB1BP1O14713 200 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 VENTXO95231 258 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 CELA3BP08861 270 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 FOXF2Q12947 444 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 MALLQ13021 153 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 RPP25LQ8N5L8 163 aaKnown RBP11.69□□□□□ -0.54
GPC1-208ENST00000469694 OR56B2PQ8NGI1 322 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 SLC35E1Q96K37 410 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 PRDM14Q9GZV8 571 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 CEACAM4O75871 244 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
GPC1-208ENST00000469694 NRN1LQ496H8 165 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms