RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 DUX4Q9UBX2 424 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 KIF25Q9UIL4 384 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 RBM7Q9Y580 266 aaKnown RBP5.02□□□□□ -1.61
PTCD3-208ENST00000469585 NAV3Q8IVL0 2385 aa5.02□□□□□ -1.61
PTCD3-208ENST00000469585 YLPM1P49750 1951 aaKnown RBP5.02□□□□□ -1.61
PTCD3-208ENST00000469585 TEP1Q99973 2627 aaKnown RBP5.01□□□□□ -1.61
PTCD3-208ENST00000469585 IGHV2-26A0A0B4J1V2 119 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 IFITM5A6NNB3 132 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 SERPINE3A8MV23 424 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 OOSP1A8MZH6 123 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 F8VVB4 439 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 F8VWA3 439 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 ORC5O43913 435 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 TFF1P04155 84 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 RBMXP38159 391 aaKnown RBP5.01□□□□□ -1.61
PTCD3-208ENST00000469585 KIR2DS4P43632 304 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 RAB7AP51149 207 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 RPS27AP62979 156 aaKnown RBP5.01□□□□□ -1.61
PTCD3-208ENST00000469585 UBA52P62987 128 aaKnown RBP5.01□□□□□ -1.61
PTCD3-208ENST00000469585 PITPNAQ00169 270 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 PAX5Q02548 391 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 ARL16Q0P5N6 197 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 KLRD1Q13241 179 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 HES1Q14469 280 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 ZNF273Q14593 569 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 KIR2DS1Q14954 304 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 AANATQ16613 207 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 LTC4SQ16873 150 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 DEFB112Q30KQ8 113 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 C1orf100Q5SVJ3 147 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 IDNKQ5T6J7 187 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 FAM27D1Q5T7N8 215 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 SYT6Q5T7P8 510 aaPredicted RBP5.01□□□□□ -1.61
PTCD3-208ENST00000469585 PRAMEF5Q5TYX0 476 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 ASPHD2Q6ICH7 369 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 Q6P435 159 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 C11orf88Q6PI97 169 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 SMIM29Q86T20 159 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 TPRX1Q8N7U7 411 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 OR51D1Q8NGF3 324 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 OR13A1Q8NGR1 328 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 CCDC107Q8WV48 283 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 IL1F10Q8WWZ1 152 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 CORO2AQ92828 525 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 RAB3CQ96E17 227 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 C17orf77Q96MU5 243 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 SSX3Q99909 188 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 CMSS1Q9BQ75 279 aaKnown RBP5.01□□□□□ -1.61
PTCD3-208ENST00000469585 C19orf24Q9BVV8 132 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 ZNF696Q9H7X3 374 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 C12orf4Q9NQ89 552 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 TXNL4BQ9NX01 149 aaKnown RBP5.01□□□□□ -1.61
PTCD3-208ENST00000469585 DPM3Q9P2X0 92 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 DAPK2Q9UIK4 370 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 ETV7Q9Y603 341 aa5.01□□□□□ -1.61
PTCD3-208ENST00000469585 MTORP42345 2549 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 SONP18583 2426 aaKnown RBP5□□□□□ -1.61
PTCD3-208ENST00000469585 A0A075B6Q4 140 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 IGLV5-45A0A087WSX0 123 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 TRAV24A0A0B4J272 114 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 A0A0U1RQK1 487 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 CCDC160A6NGH7 325 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
PTCD3-208ENST00000469585 RNASEK-C17orf49H0YIS7 233 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 M0QZK8 103 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 PIN1P1O15428 100 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 SC5DO75845 299 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 SERPINB10P48595 397 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 HOXA1P49639 335 aaPredicted RBP5□□□□□ -1.61
PTCD3-208ENST00000469585 VEGFCP49767 419 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 GNG10P50151 68 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 PPP5CP53041 499 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 GNG2P59768 71 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 MXD1Q05195 221 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 INSL4Q14641 139 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 SSX2Q16385 188 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 C2orf76Q3KRA6 126 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 Q3ZCU0 254 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 KLF17Q5JT82 389 aaPredicted RBP5□□□□□ -1.61
PTCD3-208ENST00000469585 C9orf152Q5JTZ5 239 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 RSBN1Q5VWQ0 802 aaPredicted RBP5□□□□□ -1.61
PTCD3-208ENST00000469585 CD200R1LQ6Q8B3 271 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 ZNF497Q6ZNH5 498 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 LRRTM1Q86UE6 522 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 NFE4Q86UQ8 179 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 FGFRL1Q8N441 504 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 Q8NFD4 153 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 OR11H6Q8NGC7 330 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 OR52M1Q8NGK5 317 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 OR4K15Q8NH41 348 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 OR2T6Q8NHC8 308 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 SPATA3Q8NHX4 192 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 PTX4Q96A99 478 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 S100A16Q96FQ6 103 aaKnown RBP5□□□□□ -1.61
PTCD3-208ENST00000469585 S1PR3Q99500 378 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 NKX3-1Q99801 234 aaPredicted RBP5□□□□□ -1.61
PTCD3-208ENST00000469585 GINS4Q9BRT9 223 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 MMP28Q9H239 520 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 OR2S2Q9NQN1 319 aa5□□□□□ -1.61
PTCD3-208ENST00000469585 ZNRD1Q9P1U0 126 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms