RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 C3orf85A0A1B0GTC6 90 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 LINC00473A8K010 186 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 RNF212BA8MTL3 300 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 HSD17B6O14756 317 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 TXNL1O43396 289 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 IFNA2P01563 188 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 P0C879 139 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 CT45A6P0DMU7 189 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 CT45A5P0DMU8 189 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 CT45A7P0DMV0 189 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 RPA2P15927 270 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 S100GP29377 79 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 THBS3P49746 956 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 DLX1P56177 255 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 RAB25P57735 213 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 SRSF4Q08170 494 aaKnown RBP6.6□□□□□ -1.35
NPHP3-204ENST00000469232 POU2AF1Q16633 256 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 ANKRD55Q3KP44 614 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 ABCA11PQ4W5N1 156 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 DCAF12L2Q5VW00 463 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 CYB5R2Q6BCY4 276 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 C11orf88Q6PI97 169 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 TMED4Q7Z7H5 227 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 CIARTQ8N365 385 aaPredicted RBP6.6□□□□□ -1.35
NPHP3-204ENST00000469232 PNKDQ8N490 385 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 TP53RKQ96S44 253 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 SEC22CQ9BRL7 303 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 LPAR2Q9HBW0 351 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 SIRT7Q9NRC8 400 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 LIN7CQ9NUP9 197 aaKnown RBP6.6□□□□□ -1.35
NPHP3-204ENST00000469232 ZNRD1Q9P1U0 126 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 DPM3Q9P2X0 92 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 KCNIP3Q9Y2W7 256 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 AUP1Q9Y679 476 aa6.6□□□□□ -1.35
NPHP3-204ENST00000469232 ZNF469Q96JG9 3925 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 PIGBOS1A0A0B4J2F0 54 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 IGHV1-69DA0A0B4J2H0 117 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 A0A1W2PPE3 182 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 DUXBA0A1W2PPF3 345 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 A0A1W2PPI3 338 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 HMX3A6NHT5 357 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 FAM90A9PA6NNJ1 464 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 TOR1AO14656 332 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 CREBL2O60519 120 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 OR2A4O95047 310 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 IGKV1-39P01597 117 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 IGHV1-69P01742 117 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 IGHV3-7P01780 117 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 HLA-AP01891 365 aaKnown RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 IGKV1D-39P04432 117 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 IL6RP08887 468 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 OR5AC1P0C628 307 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 SULT1A3P0DMM9 295 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 SULT1A4P0DMN0 295 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 AKR1C4P17516 323 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 IL3RAP26951 378 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 HTR1DP28221 377 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 KIR2DS2P43631 304 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 GNG10P50151 68 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 BCAP31P51572 246 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 RRAS2P62070 204 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 SRPXP78539 464 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 KLRD1Q13241 179 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 EBI3Q14213 229 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 RPL39P5Q59GN2 51 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 KLF17Q5JT82 389 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 TPTE2P1Q5T6R2 138 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 C9orf139Q6ZV77 190 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 OR8H3Q8N146 312 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 LYG1Q8N1E2 194 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 C12orf45Q8N5I9 185 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 ZNF383Q8NA42 475 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 OR52B4Q8NGK2 314 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 OR10X1Q8NGY0 326 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 LHFPL5Q8TAF8 219 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 CD300LFQ8TDQ1 290 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 CFHR4Q92496 578 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 C18orf12Q96KH6 178 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 OR2A7Q96R45 310 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 SSBP4Q9BWG4 385 aaPredicted RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 PLEKHA2Q9HB19 425 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 RBM7Q9Y580 266 aaKnown RBP6.59□□□□□ -1.35
NPHP3-204ENST00000469232 ABCA1O95477 2261 aa6.59□□□□□ -1.35
NPHP3-204ENST00000469232 LEUTXA8MZ59 168 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 H0YJW9 148 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 M0R1X1 148 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 GAPDHP04406 335 aaKnown RBP6.58□□□□□ -1.36
NPHP3-204ENST00000469232 RRASP10301 218 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 ANXA3P12429 323 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 DYNLT3P51808 116 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 CATR1Q13166 79 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 AARDQ4LEZ3 155 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 C4orf46Q504U0 113 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 DHRS7BQ6IAN0 325 aaPredicted RBP6.58□□□□□ -1.36
NPHP3-204ENST00000469232 WFDC12Q8WWY7 111 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 MALSU1Q96EH3 234 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 GPHA2Q96T91 129 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 BEX2Q9BXY8 128 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 PRDM13Q9H4Q3 707 aa6.58□□□□□ -1.36
NPHP3-204ENST00000469232 C7orf69Q9H7B7 122 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms